RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 KCTD1Q719H9 257 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 ZNF605Q86T29 641 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 ARRDC4Q8NCT1 418 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 OR2W6PQ8NHA6 318 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 BRINP2Q9C0B6 783 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.59□□□□□ -0.71
MRPS35-204ENST00000542199 H2AFY2Q9P0M6 372 aaPredicted RBP10.59□□□□□ -0.71
MRPS35-204ENST00000542199 ASH2LQ9UBL3 628 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
MRPS35-204ENST00000542199 ZNF831Q5JPB2 1677 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 ATP2A2P16615 1042 aaKnown RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 ID4P47928 161 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 CDKN1CP49918 316 aaPredicted RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 YBX1P67809 324 aaKnown RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 DHCR24Q15392 516 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 SEC23AQ15436 765 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 FIGNQ5HY92 759 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 TMC6Q7Z403 805 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 KIF18BQ86Y91 864 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 CLEC4DQ8WXI8 215 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 TSPAN17Q96FV3 270 aa10.58□□□□□ -0.72
MRPS35-204ENST00000542199 THG1LQ9NWX6 298 aaKnown RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
MRPS35-204ENST00000542199 SLC12A8A0AV02 714 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 EYA4O95677 639 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 HMOX1P09601 288 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 ZBTB48P10074 688 aaPredicted RBP10.57□□□□□ -0.72
MRPS35-204ENST00000542199 JUNBP17275 347 aaPredicted RBP10.57□□□□□ -0.72
MRPS35-204ENST00000542199 IBSPP21815 317 aaPredicted RBP10.57□□□□□ -0.72
MRPS35-204ENST00000542199 VIPR1P32241 457 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 SCNN1BP51168 640 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 GRIN1Q05586 938 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 CYP4F22Q6NT55 531 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 ZC3H14Q6PJT7 736 aaKnown RBP10.57□□□□□ -0.72
MRPS35-204ENST00000542199 SMC1BQ8NDV3 1235 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 CHTF18Q8WVB6 975 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
MRPS35-204ENST00000542199 DIRC2Q96SL1 478 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 BOCQ9BWV1 1114 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 ZKSCAN5Q9Y2L8 839 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 ATP8A1Q9Y2Q0 1164 aa10.57□□□□□ -0.72
MRPS35-204ENST00000542199 MRC1P22897 1456 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 SCDO00767 359 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 NEMP1O14524 444 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 MAFKO60675 156 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 GAS7O60861 476 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 RPS6KA4O75676 772 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 ZNF200P98182 395 aaPredicted RBP10.56□□□□□ -0.72
MRPS35-204ENST00000542199 IRF9Q00978 393 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 PRR23BQ6ZRT6 265 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.56□□□□□ -0.72
MRPS35-204ENST00000542199 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
MRPS35-204ENST00000542199 PHOSPHO1Q8TCT1 267 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 USP7Q93009 1102 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 ATP23Q9Y6H3 246 aa10.56□□□□□ -0.72
MRPS35-204ENST00000542199 FAM90A27PA6NNH2 459 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 DVL2O14641 736 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
MRPS35-204ENST00000542199 MMP10P09238 476 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 BPIP17213 487 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 IL2P60568 153 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
MRPS35-204ENST00000542199 NSUN3Q9H649 340 aaKnown RBP10.55□□□□□ -0.72
MRPS35-204ENST00000542199 ZNF552Q9H707 407 aaPredicted RBP10.55□□□□□ -0.72
MRPS35-204ENST00000542199 OXSMQ9NWU1 459 aa10.55□□□□□ -0.72
MRPS35-204ENST00000542199 CHD4Q14839 1912 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 GYS1P13807 737 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 COL5A3P25940 1745 aaPredicted RBP10.54□□□□□ -0.72
MRPS35-204ENST00000542199 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
MRPS35-204ENST00000542199 EPHA5P54756 1037 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 PRPF38AQ8NAV1 312 aaKnown RBP10.54□□□□□ -0.72
MRPS35-204ENST00000542199 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 ALG3Q92685 438 aa10.54□□□□□ -0.72
MRPS35-204ENST00000542199 TAL1P17542 331 aaPredicted RBP10.53□□□□□ -0.72
MRPS35-204ENST00000542199 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
MRPS35-204ENST00000542199 PMLP29590 882 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 IGBP1P78318 339 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 TMEM62Q0P6H9 643 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 STAT4Q14765 748 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 SLC9A5Q14940 896 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
MRPS35-204ENST00000542199 ARHGAP44Q17R89 818 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 NLGN4XQ8N0W4 816 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
MRPS35-204ENST00000542199 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
MRPS35-204ENST00000542199 MYH14Q7Z406 1995 aaKnown RBP10.53□□□□□ -0.72
MRPS35-204ENST00000542199 C10orf71Q711Q0 1435 aa10.52□□□□□ -0.73
MRPS35-204ENST00000542199 MYOCOSA0A1B0GUC4 107 aa10.52□□□□□ -0.73
MRPS35-204ENST00000542199 ACOT7O00154 380 aa10.52□□□□□ -0.73
MRPS35-204ENST00000542199 CLASP2O75122 1294 aaKnown RBP10.52□□□□□ -0.73
MRPS35-204ENST00000542199 FKBP9O95302 570 aa10.52□□□□□ -0.73
MRPS35-204ENST00000542199 CDK11BP21127 795 aaKnown RBP10.52□□□□□ -0.73
MRPS35-204ENST00000542199 RFC4P35249 363 aa10.52□□□□□ -0.73
MRPS35-204ENST00000542199 ANAPC15P60006 121 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms