RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 PTPRSQ13332 1948 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 PPP6R2O75170 966 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 BRD1O95696 1058 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 AXLP30530 894 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 RABGGTBP53611 331 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 GRB10Q13322 594 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 TMEM119Q4V9L6 283 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 TTYH1Q9H313 450 aaPredicted RBP15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
TNFSF13B-206ENST00000542136 A0A087WWV3 80 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 A0A0U1RQF3 1178 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 E9PMD0 336 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 SPTLC2O15270 562 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 DGKIO75912 1065 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 EOMESO95936 686 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 CA3P07451 260 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 SKIP12755 728 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 GLRA2P23416 452 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 GUCY2CP25092 1073 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 NCBP1Q09161 790 aaKnown RBP15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 C1orf186Q6ZWK4 172 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 ZNF689Q96CS4 500 aaPredicted RBP15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 NTPCRQ9BSD7 190 aaKnown RBP15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 NKX2-4Q9H2Z4 354 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 TMEM161AQ9NX61 479 aa15.27■□□□□ 0.04
TNFSF13B-206ENST00000542136 LAMA3Q16787 3333 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 MGEA5O60502 916 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZNF623O75123 536 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 NAMPTP43490 491 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 TAP1Q03518 808 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 CAPSQ13938 189 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 KCNG4Q8TDN1 519 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 DRC1Q96MC2 740 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 CSRNP2Q9H175 543 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 POLR3FQ9H1D9 316 aaPredicted RBP15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 C2orf40Q9H1Z8 148 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 AGPAT5Q9NUQ2 364 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 TFIP11Q9UBB9 837 aaKnown RBP15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 STK17AQ9UEE5 414 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 PCDHB7Q9Y5E2 793 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 LAMA2P24043 3122 aaKnown RBP15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 GBF1Q92538 1859 aa15.26■□□□□ 0.03
TNFSF13B-206ENST00000542136 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 HOXA2O43364 376 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 MYOGP15173 224 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 SCP2P22307 547 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 DDIT3P35638 169 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 TXLNAP40222 546 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 RAB27AP51159 221 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 EFNA5P52803 228 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 SLC12A3P55017 1021 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 ERVK-21P61565 698 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 GRIN1Q05586 938 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 PKP1Q13835 747 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 STK38Q15208 465 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 FAM102BQ5T8I3 360 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 CATSPER4Q7RTX7 472 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 ASAP3Q8TDY4 903 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 CCDC51Q96ER9 411 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZNF668Q96K58 619 aaPredicted RBP15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 PRIMPOLQ96LW4 560 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 MINDY3Q9H8M7 445 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 LRFN2Q9ULH4 789 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZDHHC9Q9Y397 364 aa15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 RBM19Q9Y4C8 960 aaKnown RBP15.25■□□□□ 0.03
TNFSF13B-206ENST00000542136 MYH15Q9Y2K3 1946 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 LINC01553A4QN01 128 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 CUTAO60888 179 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 CSDE1O75534 798 aaKnown RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 UPP2O95045 317 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 SLC34A2O95436 690 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 PLA2G4BP0C869 781 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 POU3F3P20264 500 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 HOXA11P31270 313 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms