RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 MST1RQ04912 1400 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 VWDEQ8N2E2 1590 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 UPP2O95045 317 aa13.33□□□□□ -0.27
KDM3A-216ENST00000542128 MARK3P27448 753 aa13.33□□□□□ -0.27
KDM3A-216ENST00000542128 TPD52P55327 224 aaPredicted RBP13.33□□□□□ -0.27
KDM3A-216ENST00000542128 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.27
KDM3A-216ENST00000542128 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.27
KDM3A-216ENST00000542128 IRGCQ6NXR0 463 aa13.33□□□□□ -0.27
KDM3A-216ENST00000542128 CAPN12Q6ZSI9 719 aa13.33□□□□□ -0.27
KDM3A-216ENST00000542128 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.278e-8■■■■□ 21
KDM3A-216ENST00000542128 NT5C3AQ9H0P0 336 aa13.33□□□□□ -0.27
KDM3A-216ENST00000542128 GRID2IPA4D2P6 1211 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 HAUS5O94927 633 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 UBXN2AP68543 259 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 TMED2Q15363 201 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 CALCRLQ16602 461 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 TSEN2Q8NCE0 465 aaKnown RBP13.33□□□□□ -0.28
KDM3A-216ENST00000542128 EPAS1Q99814 870 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 PANK4Q9NVE7 773 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 A0A0G2JND7 137 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 CAVIN3Q969G5 261 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 DCLRE1BQ9H816 532 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 TBC1D23Q9NUY8 699 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 EHD2Q9NZN4 543 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 CPS1P31327 1500 aa13.33□□□□□ -0.28
KDM3A-216ENST00000542128 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 KRT75O95678 551 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 CA4P22748 312 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ADCY8P40145 1251 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ADARP55265 1226 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 XRCC4Q13426 336 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 TRPC3Q13507 836 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 KCNB2Q92953 911 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 EPSTI1Q96J88 318 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 PACSIN2Q9UNF0 486 aaPredicted RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 CD163L1Q9NR16 1453 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 DCCP43146 1447 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 DPPA5A6NC42 116 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ZWINTO95229 277 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 STAT2P52630 851 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ERVK-24P63145 666 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 RASA3Q14644 834 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 RCN1Q15293 331 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 PRAMEF18Q5VWM3 479 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 KRT80Q6KB66 452 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 SRRM1Q8IYB3 904 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 HDAC7Q8WUI4 952 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.285e-7■■□□□ 14.5
KDM3A-216ENST00000542128 ATP6V0A1Q93050 837 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 TRAPPC9Q96Q05 1148 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 GGA3Q9NZ52 723 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 WDR91A4D1P6 747 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 E7ENQ6 273 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 GYS1P13807 737 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 HOXD10P28358 340 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 DMPKQ09013 629 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 LRRC36Q1X8D7 754 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 NDUFA13Q9P0J0 144 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
KDM3A-216ENST00000542128 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
KDM3A-216ENST00000542128 CAPN9O14815 690 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 GMNNO75496 209 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 AGTP01019 485 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 IMPDH2P12268 514 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 PTPREP23469 700 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 MCAMP43121 646 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 MAGEA8P43361 318 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 SH3GL2Q99962 352 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 PUS7LQ9H0K6 701 aaKnown RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 DCTN4Q9UJW0 460 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 LSM1O15116 133 aaKnown RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 FGGP02679 453 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 OATP04181 439 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 RBBP8NLQ8NC74 664 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-216ENST00000542128 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
KDM3A-216ENST00000542128 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms