RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CUTAO60888 179 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 LILRB5O75023 590 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GFPT2O94808 682 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 STAMBPO95630 424 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 PF4P02776 101 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CTAGE8P0CG41 777 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ACADSP16219 412 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ATF4P18848 351 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TFE3P19532 575 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CD9P21926 228 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 RXRBP28702 533 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CA8P35219 290 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GNL1P36915 607 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ARL4DP49703 201 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ELF3P78545 371 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 RASSF7Q02833 373 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ITIH3Q06033 890 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 DMPKQ09013 629 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 HSPA14Q0VDF9 509 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TRAP1Q12931 704 aaKnown RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 AP3B2Q13367 1082 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CAMK2GQ13555 558 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ITGA7Q13683 1181 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ITGA9Q13797 1035 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 DDB1Q16531 1140 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 STX1AQ16623 288 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GSTA3Q16772 222 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF423Q2M1K9 1284 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GLE1Q53GS7 698 aaKnown RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SMUG1Q53HV7 270 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ZMYM1Q5SVZ6 1142 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 NAA35Q5VZE5 725 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF787Q6DD87 383 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CCSAPQ6IQ19 270 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GDF6Q6KF10 455 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 FAM117BQ6P1L5 589 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TUBA3EQ6PEY2 450 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CTAGE6Q86UF2 777 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CCDC83Q8IWF9 413 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 BRSK2Q8IWQ3 736 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SULF2Q8IWU5 870 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CTAGE4Q8IX94 777 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 DZIP1LQ8IYY4 767 aaKnown RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CARNMT1Q8N4J0 409 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CHCHD4Q8N4Q1 142 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ENOX1Q8TC92 643 aaKnown RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.71□□□□□ -1.666e-13■■□□□ 14.1
SNHG1-219ENST00000542112 AZIN2Q96A70 460 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SDCCAG3Q96C92 435 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 HIC2Q96JB3 615 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CDHR1Q96JP9 859 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TIPINQ9BVW5 301 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CARD11Q9BXL7 1154 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SLC7A5P2Q9GIP4 190 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 DRC3Q9H069 523 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 MIR1-1HGQ9H1L0 117 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CLSTN2Q9H4D0 955 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ANKZF1Q9H8Y5 726 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 JPH1Q9HDC5 661 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SH2B1Q9NRF2 756 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 PCMTD2Q9NV79 361 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 MKS1Q9NXB0 559 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 STK39Q9UEW8 545 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 XPO7Q9UIA9 1087 aaKnown RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 SCOCQ9UIL1 159 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 FAM184BQ9ULE4 1060 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 ASAP1Q9ULH1 1129 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 STRIP2Q9ULQ0 834 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 HPCAL4Q9UM19 191 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TRAF3IP3Q9Y228 551 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 TLR6Q9Y2C9 796 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 EFR3BQ9Y2G0 817 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 GIT1Q9Y2X7 761 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 KDM6AO15550 1401 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CLTCQ00610 1675 aaKnown RBP4.7□□□□□ -1.66
SNHG1-219ENST00000542112 UGGT1Q9NYU2 1555 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 TMEM94Q12767 1356 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 TRIM43BA6NCK2 446 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 C5orf60A6NFR6 353 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 ANKRD65E5RJM6 399 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 GOLGA8TH3BQL2 631 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 STX10O60499 249 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 GREM1O60565 184 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 ZC3H11AO75152 810 aaKnown RBP eCLIP4.7□□□□□ -1.661e-6■■□□□ 11.7
SNHG1-219ENST00000542112 RAB11FIP3O75154 756 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 PAGE1O75459 146 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 BCAR3O75815 825 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 ADAMTS2O95450 1211 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 FGFR1OPO95684 399 aaKnown RBP4.7□□□□□ -1.66
SNHG1-219ENST00000542112 LMNAP02545 664 aaKnown RBP4.7□□□□□ -1.66
SNHG1-219ENST00000542112 CLTAP09496 248 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 FGRP09769 529 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 GOLGA8HP0CJ92 632 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 TGFB3P10600 412 aa4.7□□□□□ -1.66
SNHG1-219ENST00000542112 ATP2A2P16615 1042 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms