RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 NOP58Q9Y2X3 529 aaKnown RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 COL4A3BPQ9Y5P4 624 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 LRRFIP2Q9Y608 721 aaKnown RBP6.57□□□□□ -1.36
CPSF7-220ENST00000541963 COL4A1P02462 1669 aa6.57□□□□□ -1.36
CPSF7-220ENST00000541963 A0A1W2PQ27 194 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 A0A1W2PQ64 194 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 A0A1W2PQC6 194 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 A0A1W2PQD8 194 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 WTIPA6NIX2 430 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 SRGAP3O43295 1099 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 NPHS1O60500 1241 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 ASLP04424 464 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 SLC5A1P13866 664 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 RFX5P48382 616 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 GPR85P60893 370 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 TEKQ02763 1124 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 PUM3Q15397 648 aaKnown RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 NTRK3Q16288 839 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 LRRC24Q50LG9 513 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 RTP2Q5QGT7 225 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 BRAPQ7Z569 592 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 SLC7A14Q8TBB6 771 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 LPIN2Q92539 896 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 CHAMP1Q96JM3 812 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 MEIS3Q99687 375 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 MYOZ2Q9NPC6 264 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 GNL3LQ9NVN8 582 aaKnown RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 TNFRSF10DQ9UBN6 386 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 ABT1Q9ULW3 272 aaKnown RBP6.56□□□□□ -1.36
CPSF7-220ENST00000541963 TRAF6Q9Y4K3 522 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 ZNF609O15014 1411 aa6.56□□□□□ -1.36
CPSF7-220ENST00000541963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 SNAP23O00161 211 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 CELF2O95319 508 aaKnown RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 CPEP16870 476 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 KLRK1P26718 216 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 ECE1P42892 770 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 GYG1P46976 350 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 NEK4P51957 841 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 GTF2A2P52657 109 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 HTRA3P83110 453 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 BNIP3Q12983 259 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 G3BP1Q13283 466 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 DLGAP5Q15398 846 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 LRRTM3Q86VH5 581 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 ITPRIPQ8IWB1 547 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 PPM1KQ8N3J5 372 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 C2orf69Q8N8R5 385 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 GSTCDQ8NEC7 633 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 TDRD7Q8NHU6 1098 aaKnown RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 KLHDC4Q8TBB5 520 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 TBC1D22AQ8WUA7 517 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 FAM84BQ96KN1 310 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 GLIS2Q9BZE0 524 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 RCAN3Q9UKA8 241 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 ANGEL1Q9UNK9 670 aaKnown RBP6.55□□□□□ -1.36
CPSF7-220ENST00000541963 MAPRE3Q9UPY8 281 aa6.55□□□□□ -1.36
CPSF7-220ENST00000541963 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 FAM205AQ6ZU69 1335 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 SHTN1A0MZ66 631 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 CRTAMO95727 393 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 NF2P35240 595 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 IGFALSP35858 605 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF7-220ENST00000541963 ATP8B2P98198 1209 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 ZP2Q05996 745 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 MTX1Q13505 466 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 TESK1Q15569 626 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 SLC14A2Q15849 920 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 ATP2B3Q16720 1220 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 MSMPQ1L6U9 139 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 DENND5AQ6IQ26 1287 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 DDX53Q86TM3 631 aaKnown RBP6.54□□□□□ -1.36
CPSF7-220ENST00000541963 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 SPPL2CQ8IUH8 684 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
CPSF7-220ENST00000541963 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-220ENST00000541963 MXD3Q9BW11 206 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 SIL1Q9H173 461 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 TRIM39Q9HCM9 518 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 PCDH12Q9NPG4 1184 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 TIMM13Q9Y5L4 95 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-220ENST00000541963 NPFFR2Q9Y5X5 522 aa6.54□□□□□ -1.36
CPSF7-220ENST00000541963 IRS2Q9Y4H2 1338 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 SCN9AQ15858 1988 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 PSME4Q14997 1843 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 TMEM82A0PJX8 343 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms