RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ASB1Q9Y576 335 aa6.76□□□□□ -1.33
CIT-211ENST00000541841 HS3ST3A1Q9Y663 406 aa6.76□□□□□ -1.33
CIT-211ENST00000541841 PLD2O14939 933 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 PLSCR1O15162 318 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 ATF3P18847 181 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 SDHAP31040 664 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 MSX2P35548 267 aaPredicted RBP6.75□□□□□ -1.33
CIT-211ENST00000541841 DGCR2P98153 550 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 FOXL1Q12952 345 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 ADAM15Q13444 863 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 TSHZ1Q6ZSZ6 1077 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 RTN4RL1Q86UN2 441 aaPredicted RBP6.75□□□□□ -1.33
CIT-211ENST00000541841 LRRTM3Q86VH5 581 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 GPR135Q8IZ08 494 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 BCL6BQ8N143 479 aaPredicted RBP6.75□□□□□ -1.33
CIT-211ENST00000541841 ZNF808Q8N4W9 903 aaPredicted RBP6.75□□□□□ -1.33
CIT-211ENST00000541841 TMEM176AQ96HP8 235 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 ZNF341Q9BYN7 854 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 SAMD15Q9P1V8 674 aa6.75□□□□□ -1.33
CIT-211ENST00000541841 ING1Q9UK53 422 aaPredicted RBP6.75□□□□□ -1.33
CIT-211ENST00000541841 DNAJC8O75937 253 aaPredicted RBP6.74□□□□□ -1.33
CIT-211ENST00000541841 EYA4O95677 639 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 GDF5P43026 501 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 RGS3P49796 1198 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 FNDC3BQ53EP0 1204 aaKnown RBP6.74□□□□□ -1.33
CIT-211ENST00000541841 SYCP2LQ5T4T6 812 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 TICAM2Q86XR7 235 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 MTMR8Q96EF0 704 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 MPHOSPH6Q99547 160 aaKnown RBP6.74□□□□□ -1.33
CIT-211ENST00000541841 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 OR10A2Q9H208 303 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 SEMA4AQ9H3S1 761 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 CHST12Q9NRB3 414 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 ZIM2Q9NZV7 527 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
CIT-211ENST00000541841 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
CIT-211ENST00000541841 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 FAM83GA6ND36 823 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 NPIPB8E9PQR5 432 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 AKAP10O43572 662 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 CAND2O75155 1236 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 ACVRL1P37023 503 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 NEK2P51955 445 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 KIF11P52732 1056 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 ALDH6A1Q02252 535 aaKnown RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 HGFACQ04756 655 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 STRN3Q13033 797 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 KLF10Q13118 480 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 MTMR1Q13613 665 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 POLNQ7Z5Q5 900 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 MYO1HQ8N1T3 1032 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 LEO1Q8WVC0 666 aaPredicted RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 SLC39A13Q96H72 371 aa6.73□□□□□ -1.33
CIT-211ENST00000541841 CCDC8Q9H0W5 538 aaPredicted RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 AGO3Q9H9G7 860 aaKnown RBP6.73□□□□□ -1.33
CIT-211ENST00000541841 PLIN1O60240 522 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 OPA1O60313 960 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 FZD7O75084 574 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 KRT18P05783 430 aaKnown RBP6.72□□□□□ -1.33
CIT-211ENST00000541841 SLC6A3Q01959 620 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 DDX46Q7L014 1031 aaKnown RBP6.72□□□□□ -1.33
CIT-211ENST00000541841 OTOP1Q7RTM1 612 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
CIT-211ENST00000541841 CHPFQ8IZ52 775 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 CALML6Q8TD86 181 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 EDAQ92838 391 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 SORCS2Q96PQ0 1159 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 ARNT2Q9HBZ2 717 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 PLA2G3Q9NZ20 509 aa6.72□□□□□ -1.33
CIT-211ENST00000541841 PTPDC1A2A3K4 754 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 TRAF5O00463 557 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 LDHAP00338 332 aaKnown RBP6.71□□□□□ -1.34
CIT-211ENST00000541841 ANTXR2P58335 489 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 ITKQ08881 620 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 FOXE3Q13461 319 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 SAFB2Q14151 953 aaKnown RBP eCLIP6.71□□□□□ -1.34
CIT-211ENST00000541841 PIK3R6Q5UE93 754 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 PPP4R4Q6NUP7 873 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 CC2D1AQ6P1N0 951 aaPredicted RBP6.71□□□□□ -1.34
CIT-211ENST00000541841 MAMDC4Q6UXC1 1216 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 CHST14Q8NCH0 376 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 TTC8Q8TAM2 541 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 TLR9Q9NR96 1032 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 HECAQ9UBI9 543 aaPredicted RBP6.71□□□□□ -1.34
CIT-211ENST00000541841 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.34
CIT-211ENST00000541841 COMMD10Q9Y6G5 202 aa6.71□□□□□ -1.34
CIT-211ENST00000541841 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 PPFIA4O75335 1185 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 NPTXRO95502 500 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 PRLP01236 227 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 C1SP09871 688 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 PAX3P23760 479 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 PTX3P26022 381 aaPredicted RBP6.7□□□□□ -1.34
CIT-211ENST00000541841 IGFALSP35858 605 aa6.7□□□□□ -1.34
CIT-211ENST00000541841 ATP2C1P98194 919 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms