RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
ERBB2-204ENST00000541774 ATP1A4Q13733 1029 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 TNIP1Q15025 636 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 CDC42BPGQ6DT37 1551 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 ELOA2Q8IYF1 753 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-204ENST00000541774 ZNF280CQ8ND82 737 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 USP33Q8TEY7 942 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 TTC17Q96AE7 1141 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 DNAI2Q9GZS0 605 aa11.78□□□□□ -0.52
ERBB2-204ENST00000541774 O00370 1275 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.52
ERBB2-204ENST00000541774 PRDM1O75626 825 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 PMS1P54277 932 aaKnown RBP11.77□□□□□ -0.52
ERBB2-204ENST00000541774 MTA1Q13330 715 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 SGO2Q562F6 1265 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 CYP39A1Q9NYL5 469 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 USTQ9Y2C2 406 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.52
ERBB2-204ENST00000541774 SPDYE5A6NIY4 337 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 SRRM3A6NNA2 597 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 B2RBV5 119 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 RGS2P41220 211 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 GALK1P51570 392 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 ARHGAP4P98171 946 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 SLC34A1Q06495 639 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 WASHC2DQ5SRD0 308 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 GALNT17Q6IS24 598 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 CLEC4GQ6UXB4 293 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 XAGE2Q96GT9 111 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 SH3GL1Q99961 368 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 PAIP1Q9H074 479 aaKnown RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 GREM2Q9H772 168 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 KIF28PB7ZC32 967 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 MT-ND3P03897 115 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 FNTAP49354 379 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 KIF22Q14807 665 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 QPCTQ16769 361 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 TMEM237Q96Q45 408 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 GNA14O95837 355 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 KRT16P08779 473 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 OCM2P0CE71 109 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 CYP7A1P22680 504 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 GNAQP50148 359 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 RAP1GDS1P52306 607 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 DNAJC3Q13217 504 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 HIC1Q14526 733 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 RIBC1Q8N443 379 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-204ENST00000541774 PRELID1Q9Y255 219 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
ERBB2-204ENST00000541774 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 ENO1P06733 434 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 XRCC5P13010 732 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 NCF2P19878 526 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 CPA2P48052 419 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 KCNMA1Q12791 1236 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 ZNF211Q13398 564 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 CEP55Q53EZ4 464 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 C6orf50Q9HD87 102 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 LAMC1P11047 1609 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 KRT38O76015 456 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 MMP1P03956 469 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 KRT5P13647 590 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 EPHB2P29323 1055 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 NXNQ6DKJ4 435 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 TAB3Q8N5C8 712 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 EFHD1Q9BUP0 239 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 WDR37Q9Y2I8 494 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 DDHD2O94830 711 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 PLS3P13797 630 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 S100A1P23297 94 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 MAP4P27816 1152 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 TBX2Q13207 712 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
ERBB2-204ENST00000541774 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 C10orf76Q5T2E6 689 aa11.76□□□□□ -0.53
ERBB2-204ENST00000541774 IYDQ6PHW0 289 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms