RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 F13A1P00488 732 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 GLRA2P23416 452 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 PTENP60484 403 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 TAP1Q03518 808 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 TFDP1Q14186 410 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 FAM102BQ5T8I3 360 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 PLIN2Q99541 437 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 NT5C3AQ9H0P0 336 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
SLC3A2-216ENST00000541372 C9IYK1 514 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 ARHGEF15O94989 841 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 PPP2R2DQ66LE6 453 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 NPAS4Q8IUM7 802 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 GUCD1Q96NT3 240 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 CCSER1Q9C0I3 900 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
SLC3A2-216ENST00000541372 EVPLQ92817 2033 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 DGKIO75912 1065 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 PHKA2P46019 1235 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 CAPSQ13938 189 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 RINT1Q6NUQ1 792 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 C1orf186Q6ZWK4 172 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 SYT2Q8N9I0 419 aaPredicted RBP17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 KRI1Q8N9T8 703 aaKnown RBP17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 YME1L1Q96TA2 773 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 NFKBIZQ9BYH8 718 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
SLC3A2-216ENST00000541372 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
SLC3A2-216ENST00000541372 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 BRD1O95696 1058 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 STK38Q15208 465 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 ELAC1Q9H777 363 aaKnown RBP17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 LRFN2Q9ULH4 789 aa17.08■□□□□ 0.32
SLC3A2-216ENST00000541372 LINC01553A4QN01 128 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 SPTLC2O15270 562 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 PPP6R2O75170 966 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 YEATS4O95619 227 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 KARSQ15046 597 aaKnown RBP17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 PCBP1Q15365 356 aaKnown RBP eCLIP17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 RUSC1Q9BVN2 902 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 CHD9Q3L8U1 2897 aa17.07■□□□□ 0.32
SLC3A2-216ENST00000541372 INO80B-WBP1J3KQ70 363 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 SLC34A2O95436 690 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 DDIT3P35638 169 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 ERVK-21P61565 698 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 MBTD1Q05BQ5 628 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 ECHDC2Q86YB7 292 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 SYMPKQ92797 1274 aaKnown RBP17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 TGS1Q96RS0 853 aaKnown RBP17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 CERS4Q9HA82 394 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 RC3H2Q9HBD1 1191 aaKnown RBP17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 AGPAT5Q9NUQ2 364 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 TMEM161AQ9NX61 479 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
SLC3A2-216ENST00000541372 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
SLC3A2-216ENST00000541372 HIP1RO75146 1068 aa17.05■□□□□ 0.32
SLC3A2-216ENST00000541372 EOMESO95936 686 aa17.05■□□□□ 0.32
SLC3A2-216ENST00000541372 PLCG1P19174 1290 aa17.05■□□□□ 0.32
SLC3A2-216ENST00000541372 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms