RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 ACSL3O95573 720 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 KCNA2P16389 499 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 MAP2K2P36507 400 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 MXI1P50539 228 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 BCAS4Q8TDM0 211 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 GCOM2Q9BZD3 368 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ATP6V0A4Q9HBG4 840 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SOAT1P35610 550 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 TMPRSS15P98073 1019 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 DHX36Q9H2U1 1008 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 COPG1Q9Y678 874 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 P4HA2O15460 535 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 RFX3P48380 749 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 FAM83BQ5T0W9 1011 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SNRNP48Q6IEG0 339 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 TDRD7Q8NHU6 1098 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SEPT5Q99719 369 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 KIAA1468Q9P260 1216 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 EPN1Q9Y6I3 576 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ASXL2Q76L83 1435 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ABCB11O95342 1321 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ATP1A1P05023 1023 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 KRT77Q7Z794 578 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 CLIC4Q9Y696 253 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 NBNO60934 754 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 HMOX2P30519 316 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 COPB1P53618 953 aaKnown RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ALFQ53S48 1182 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 GTF2A1LQ9UNN4 478 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 BBOX1O75936 387 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 CCDC142Q17RM4 750 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 MB21D1Q8N884 522 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 FBXO18Q8NFZ0 1043 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 KRT17Q04695 432 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 RALGDSQ12967 914 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 LRRC24Q50LG9 513 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF496Q96IT1 587 aaPredicted RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 PPIEQ9UNP9 301 aaKnown RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 M0QYV0 167 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 FGAP02671 866 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ACADMP11310 421 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 TUBB6Q9BUF5 446 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 EML4Q9HC35 981 aaKnown RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF518AQ6AHZ1 1483 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 COPEO14579 308 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ADORA1P30542 326 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 FASTKD1Q53R41 847 aaKnown RBP10.65□□□□□ -0.7
TRERF1-205ENST00000541110 FSCBQ5H9T9 825 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 PDIK1LQ8N165 341 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 AP1M1Q9BXS5 423 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
TRERF1-205ENST00000541110 ALDH1A3P47895 512 aa10.65□□□□□ -0.71
TRERF1-205ENST00000541110 NDUFA8P51970 172 aa10.65□□□□□ -0.71
TRERF1-205ENST00000541110 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.71
TRERF1-205ENST00000541110 ECT2Q9H8V3 914 aa10.65□□□□□ -0.71
TRERF1-205ENST00000541110 KPNA7A9QM74 516 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 BTBD18B2RXH4 712 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 PHKA1P46020 1223 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 DEUP1Q05D60 604 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 RGS9BPQ6ZS82 235 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
TRERF1-205ENST00000541110 APOBEC2Q9Y235 224 aaKnown RBP10.64□□□□□ -0.71
TRERF1-205ENST00000541110 FAM32AQ9Y421 112 aaKnown RBP10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ABCC4O15439 1325 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 FTCDO95954 541 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 PCP11498 1178 aaKnown RBP10.64□□□□□ -0.71
TRERF1-205ENST00000541110 JAK3P52333 1124 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ME3Q16798 604 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 CYFIP1Q7L576 1253 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ARHGEF25Q86VW2 580 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 STKLD1Q8NE28 680 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ZNF556Q9HAH1 456 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 FANCLQ9NW38 375 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ASNSP08243 561 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 CHRNA3P32297 505 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 TOMM20Q15388 145 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 FGD2Q7Z6J4 655 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 PPP2R2CQ9Y2T4 447 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 MMP10P09238 476 aa10.64□□□□□ -0.71
TRERF1-205ENST00000541110 ARHGAP15Q53QZ3 475 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms