RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ARIH2O95376 493 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 F2P00734 622 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MMP1P03956 469 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 LINC00271P0C7V0 271 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 TSPY3P0CV98 308 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 TSPY8P0CW00 308 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 ATF7P17544 494 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 ATP5JP18859 108 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 CALML3P27482 149 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 ADH6P28332 368 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MAPK1P28482 360 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 GTF2F1P35269 517 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 RPS6P62753 249 aaKnown RBP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 NAALADL2Q58DX5 795 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 CEP85Q6P2H3 762 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 BTNL9Q6UXG8 535 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 SLC30A10Q6XR72 485 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 KCTD1Q719H9 257 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF438Q7Z4V0 828 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 SERINC5Q86VE9 423 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 ADSSL1Q8N142 457 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 RGS22Q8NE09 1264 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 DCAF4Q8WV16 495 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 APBB2Q92870 758 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 WNT8BQ93098 351 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 KIF1BPQ96EK5 621 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MAF1Q9H063 256 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 BOLA2Q9H3K6 86 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 INCENPQ9NQS7 918 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MCM3APO60318 1980 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MED19A0JLT2 244 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 NDUFB5O43674 189 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 KRT37O76014 449 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 CHGBP05060 677 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 HOXD8P13378 290 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 GNAT2P19087 354 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 THPOP40225 353 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 TDO2P48775 406 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF200P98182 395 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 TFAP4Q01664 338 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 CAMK1Q14012 370 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 LY6KQ17RY6 165 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 KIAA0753Q2KHM9 967 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 ZKSCAN2Q63HK3 967 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 SND1Q7KZF4 910 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 DGLUCYQ7Z3D6 616 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 FRMD5Q7Z6J6 570 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 UBALD2Q8IYN6 164 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 GOLGA6L1Q8N7Z2 621 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 PPTC7Q8NI37 304 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 SUSD6Q92537 303 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 P2RX5Q93086 422 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 RPGRIP1Q96KN7 1286 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 ALG1Q9BT22 464 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 RC3H2Q9HBD1 1191 aaKnown RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 CNTN3Q9P232 1028 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 PLAGL2Q9UPG8 496 aa5.4□□□□□ -1.54
SNHG1-214ENST00000540865 FNDC3AQ9Y2H6 1198 aaKnown RBP5.4□□□□□ -1.54
SNHG1-214ENST00000540865 CEP250Q9BV73 2442 aa5.4□□□□□ -1.55
SNHG1-214ENST00000540865 TANC1Q9C0D5 1861 aa5.4□□□□□ -1.55
SNHG1-214ENST00000540865 MYO5AQ9Y4I1 1855 aaKnown RBP5.4□□□□□ -1.55
SNHG1-214ENST00000540865 ATRXP46100 2492 aa5.4□□□□□ -1.55
SNHG1-214ENST00000540865 ADGRA3Q8IWK6 1321 aa5.4□□□□□ -1.55
SNHG1-214ENST00000540865 FSD2A1L4K1 749 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SIN3BO75182 1162 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 PPFIA4O75335 1185 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 PDGFBP01127 241 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SLC3A2P08195 630 aaKnown RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 PCSK2P16519 638 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 ITGB7P26010 798 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SLC16A2P36021 539 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 NRIP1P48552 1158 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 NOVP48745 357 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 PUM1Q14671 1186 aaKnown RBP eCLIP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 STXBP2Q15833 593 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SLCO4C1Q6ZQN7 724 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SEPT14Q6ZU15 432 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 DHX32Q7L7V1 743 aaKnown RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 CHST3Q7LGC8 479 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 DHX37Q8IY37 1157 aaKnown RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 TMEM105Q8N8V8 129 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 TTC16Q8NEE8 873 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 SPPL3Q8TCT6 385 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 EDARADDQ8WWZ3 215 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 OSBP2Q969R2 916 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 CHMP4CQ96CF2 233 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 ZNF689Q96CS4 500 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 RMDN1Q96DB5 314 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 NSUN5Q96P11 429 aaKnown RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 IWS1Q96ST2 819 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 NACAP1Q9BZK3 213 aa5.39□□□□□ -1.55
SNHG1-214ENST00000540865 EPB41L4AQ9HCS5 686 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-214ENST00000540865 DNAJB12Q9NXW2 375 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms