RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 MAPK7Q13164 816 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 ARMC5Q96C12 935 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 FAM167AQ96KS9 214 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 CYP26B1Q9NR63 512 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 TBC1D7Q9P0N9 293 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 RSPH10B2B2RC85 870 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 STX10O60499 249 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 MFAP3LO75121 409 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 RSPH10BP0C881 870 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 FECHP22830 423 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 CASP5P51878 434 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ZNF131P52739 623 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 RBL2Q08999 1139 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 EDRF1Q3B7T1 1238 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 XKR9Q5GH70 373 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 MIIPQ5JXC2 388 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 CEP135Q66GS9 1140 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 E4F1Q66K89 784 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 TRMT1LQ7Z2T5 733 aaKnown RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 CNGA4Q8IV77 575 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 DAW1Q8N136 415 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 CEP63Q96MT8 703 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 BAG1Q99933 345 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ZHX3Q9H4I2 956 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 XPNPEP1Q9NQW7 623 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ODF2LQ9ULJ1 636 aa13.73□□□□□ -0.21
SMAD3-204ENST00000540846 ARHGEF35A5YM69 484 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 USP27XA6NNY8 438 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 TPM1P09493 284 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 CCL5P13501 91 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-204ENST00000540846 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
SMAD3-204ENST00000540846 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 EEF2KMTQ96G04 330 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
SMAD3-204ENST00000540846 PRDM10Q9NQV6 1147 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 SEL1LQ9UBV2 794 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-204ENST00000540846 SIP14410 1827 aa13.72□□□□□ -0.21
SMAD3-204ENST00000540846 EIF3DO15371 548 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 HBP1O60381 514 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 FAM13AO94988 1023 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 HOXC8P31273 242 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 FXR1P51114 621 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 HIC1Q14526 733 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 MTERF2Q49AM1 385 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 CEP170P1Q96L14 293 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
SMAD3-204ENST00000540846 PARVGQ9HBI0 331 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 UBE4BO95155 1302 aa13.71□□□□□ -0.21
SMAD3-204ENST00000540846 COL1A2P08123 1366 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 KPNA6O60684 536 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 GNA14O95837 355 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 ASGR1P07306 291 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MYL3P08590 195 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MYBP10242 640 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 INSRRP14616 1297 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 CASP14P31944 242 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 HOXD13P35453 343 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 PSEN2P49810 448 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.22
SMAD3-204ENST00000540846 ADAM17P78536 824 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MFSD10Q14728 455 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 KCNA10Q16322 511 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.22
SMAD3-204ENST00000540846 KIAA0753Q2KHM9 967 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 NELFCDQ8IXH7 590 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.22
SMAD3-204ENST00000540846 SPC25Q9HBM1 224 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 NRBP2Q9NSY0 501 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 TRAF3IP3Q9Y228 551 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 PPME1Q9Y570 386 aa13.71□□□□□ -0.22
SMAD3-204ENST00000540846 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms