RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
PAAF1-209ENST00000540659 FAM207AQ9NSI2 230 aaPredicted RBP10.47□□□□□ -0.73
PAAF1-209ENST00000540659 NRBP2Q9NSY0 501 aa10.47□□□□□ -0.73
PAAF1-209ENST00000540659 AGPAT5Q9NUQ2 364 aa10.47□□□□□ -0.73
PAAF1-209ENST00000540659 ARMCX3Q9UH62 379 aaPredicted RBP10.47□□□□□ -0.73
PAAF1-209ENST00000540659 CAPN11Q9UMQ6 739 aa10.47□□□□□ -0.73
PAAF1-209ENST00000540659 LUC7L2Q9Y383 392 aaKnown RBP10.47□□□□□ -0.73
PAAF1-209ENST00000540659 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
PAAF1-209ENST00000540659 DENND3A2RUS2 1198 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 SLC16A3O15427 465 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 AFPP02771 609 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 TNNT1P13805 278 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 ADCYAP1R1P41586 468 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 NPTX2P47972 431 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 SMTNP53814 917 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 CAP1Q01518 475 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 KCNH2Q12809 1159 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 IRF5Q13568 498 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 ALCAMQ13740 583 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 GRB14Q14449 540 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 EXOC8Q8IYI6 725 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 FAM186BQ8IYM0 893 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 MSL3Q8N5Y2 521 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 NEK11Q8NG66 645 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 NPLOC4Q8TAT6 608 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 AFAP1L1Q8TED9 768 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 ZNF592Q92610 1267 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 TMEM143Q96AN5 459 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 PPP1R13BQ96KQ4 1090 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 IFT74Q96LB3 600 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 DESI2Q9BSY9 194 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 NAA15Q9BXJ9 866 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 FAM184BQ9ULE4 1060 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
PAAF1-209ENST00000540659 DIS3Q9Y2L1 958 aaKnown RBP10.46□□□□□ -0.73
PAAF1-209ENST00000540659 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 EPHB6O15197 1021 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 EXOC3O60645 756 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 GTF2BQ00403 316 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 SP3Q02447 781 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 PTPN14Q15678 1187 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 NFIL3Q16649 462 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 TSR1Q2NL82 804 aaKnown RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 TAPT1Q6NXT6 567 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 CCDC62Q6P9F0 684 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 C17orf99Q6UX52 265 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 CACNA2D4Q7Z3S7 1137 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ZNF397Q8NF99 534 aaPredicted RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 OR8K1Q8NGG5 319 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 GOLGA5Q8TBA6 731 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ASAP3Q8TDY4 903 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 SCFD2Q8WU76 684 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ERO1AQ96HE7 468 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 MAML3Q96JK9 1138 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 CRACR2AQ9BSW2 395 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 TTYH3Q9C0H2 523 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 VTA1Q9NP79 307 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 PDLIM7Q9NR12 457 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ZHX1Q9UKY1 873 aaPredicted RBP10.45□□□□□ -0.74
PAAF1-209ENST00000540659 TBX20Q9UMR3 447 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 EXOC7Q9UPT5 735 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 FRMD4BQ9Y2L6 1034 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 PPP2R2CQ9Y2T4 447 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 CENPFP49454 3210 aa10.45□□□□□ -0.74
PAAF1-209ENST00000540659 ADGRA3Q8IWK6 1321 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 GOLGA8IPA6NC78 632 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 LRRIQ4A6NIV6 560 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 GOLGA8JA6NMD2 632 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ANKRD63C9JTQ0 380 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 CCP110O43303 1012 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ZSCAN12O43309 604 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 SNAI1O95863 264 aaPredicted RBP10.44□□□□□ -0.74
PAAF1-209ENST00000540659 GH1P01241 217 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ABCD1P33897 745 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 RFC5P40937 340 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 KCNJ6P48051 423 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ZBED6P86452 979 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 APBA1Q02410 837 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 KIF22Q14807 665 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 PLCB4Q15147 1175 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 CYP26C1Q6V0L0 522 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 TMTC1Q8IUR5 882 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 SLC17A8Q8NDX2 589 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 TMEM161BQ8NDZ6 487 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ACRBPQ8NEB7 543 aa10.44□□□□□ -0.74
PAAF1-209ENST00000540659 ZSWIM2Q8NEG5 633 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms