RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 SYT1P21579 422 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 SFNP31947 248 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 BMPR1AP36894 532 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 JAK3P52333 1124 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 PRKCEQ02156 737 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 DRP2Q13474 957 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 CTTNQ14247 550 aaKnown RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 ANO5Q75V66 913 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 KIAA0319LQ8IZA0 1049 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 LMAN2LQ9H0V9 348 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 TTC12Q9H892 705 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 BARX2Q9UMQ3 279 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-205ENST00000540434 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 OATP04181 439 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 TECP42680 631 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 NPEPPSP55786 919 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
TMEM258-205ENST00000540434 CYP4A11Q02928 519 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 EPHA7Q15375 998 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 ECM1Q16610 540 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 PTPN21Q16825 1174 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 FAM26DQ5JW98 314 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 LRRC71Q8N4P6 559 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
TMEM258-205ENST00000540434 INTS4Q96HW7 963 aaKnown RBP12.79□□□□□ -0.36
TMEM258-205ENST00000540434 ZNF668Q96K58 619 aaPredicted RBP12.79□□□□□ -0.36
TMEM258-205ENST00000540434 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
TMEM258-205ENST00000540434 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 PCDHGC5Q9Y5F6 944 aa12.79□□□□□ -0.36
TMEM258-205ENST00000540434 RRN3P2A6NIE6 340 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 H3BQV1 296 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 GLP2RO95838 553 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 GNAT1P11488 350 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 DNAJB1P25685 340 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 SLC26A2P50443 739 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 CLCN3P51790 818 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 PTGDRQ13258 359 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 ZNF484Q5JVG2 852 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 RBM23Q86U06 439 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 RDM1Q8NG50 284 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 SEPT8Q92599 483 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 MTMR6Q9Y217 621 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
TMEM258-205ENST00000540434 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-205ENST00000540434 VPS37CA5D8V6 355 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 MARCH6O60337 910 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 MED24O75448 989 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 VTNP04004 478 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 CDC25AP30304 524 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 QARSP47897 775 aaKnown RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 PSMC5P62195 406 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 RESTQ13127 1097 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 GNL2Q13823 731 aaKnown RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 PKP1Q13835 747 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 LPIN1Q14693 890 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 ZBTB33Q86T24 672 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 TMEM40Q8WWA1 233 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 LXNQ9BS40 222 aa12.77□□□□□ -0.37
TMEM258-205ENST00000540434 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-205ENST00000540434 PLXNA4Q9HCM2 1894 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 FRYLO94915 3013 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 SMIM35A0A1B0GVV1 85 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 GHRP10912 638 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 NRIP1P48552 1158 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 NUBP1P53384 320 aa12.76□□□□□ -0.37
TMEM258-205ENST00000540434 MRPS6P82932 125 aaKnown RBP12.76□□□□□ -0.37
TMEM258-205ENST00000540434 GRIN1Q05586 938 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms