RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ETNK1Q9HBU6 452 aa10.23□□□□□ -0.77
CTNNA1-243ENST00000540387 RXFP1Q9HBX9 757 aa10.23□□□□□ -0.77
CTNNA1-243ENST00000540387 SRPRBQ9Y5M8 271 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-243ENST00000540387 GRID2IPA4D2P6 1211 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 CAPN15O75808 1086 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 KLK7P49862 253 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 SCNN1DP51172 638 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 TNNC1P63316 161 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 CDK17Q00537 523 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 TRIM29Q14134 588 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 OLFML1Q6UWY5 402 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 ARHGAP27Q6ZUM4 889 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 NOSTRINQ8IVI9 506 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 ANKRD13CQ8N6S4 541 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 GATA6Q92908 595 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 MTMR8Q96EF0 704 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 VPS33BQ9H267 617 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 SLC4A4Q9Y6R1 1079 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 COL4A5P29400 1685 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 GSG1L2A8MUP6 293 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 ETS2P15036 469 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 CTDSPL2Q05D32 466 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 PARP6Q2NL67 630 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 TMC3Q7Z5M5 1100 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 NIM1KQ8IY84 436 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 STAMQ92783 540 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNF653Q96CK0 615 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 CLMNQ96JQ2 1002 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 SH3GLB1Q9Y371 365 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 USH1CQ9Y6N9 552 aa10.22□□□□□ -0.77
CTNNA1-243ENST00000540387 BUB1O43683 1085 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 ASLP04424 464 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 SKIP12755 728 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 ZFXP17010 805 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 RASA1P20936 1047 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 SKIV2L2P42285 1042 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 OXCT1P55809 520 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 HAND2P61296 217 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 GSTO1P78417 241 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 TCERG1LQ5VWI1 586 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 DUS1LQ6P1R4 473 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 SLC15A3Q8IY34 581 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 IFNL3Q8IZI9 196 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 FAM13CQ8NE31 585 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 JDP2Q8WYK2 163 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 EPSTI1Q96J88 318 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 INPP4AQ96PE3 977 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 EPB41L4AQ9HCS5 686 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 PCDHB6Q9Y5E3 794 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.77
CTNNA1-243ENST00000540387 A0A0J9YVX5 310 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 BTBD18B2RXH4 712 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 HGSO14964 777 aaPredicted RBP10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 UNC5CO95185 931 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 GJB6O95452 261 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 LDHCP07864 332 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 ITGA2BP08514 1039 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 BRCA1P38398 1863 aaKnown RBP10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 KIF11P52732 1056 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 ANTXR2P58335 489 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 CXCL9Q07325 125 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 ZNF554Q86TJ5 538 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 ZC3H18Q86VM9 953 aaKnown RBP10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 STKLD1Q8NE28 680 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 TTC8Q8TAM2 541 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 WDR60Q8WVS4 1066 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 LENG1Q96BZ8 264 aaPredicted RBP10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 UBAC1Q9BSL1 405 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 FAM114A2Q9NRY5 505 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 MYH6P13533 1939 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 DOCK2Q92608 1830 aa10.21□□□□□ -0.78
CTNNA1-243ENST00000540387 UBE2Q2LH0YL09 131 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 O00370 1275 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 YBX3P16989 372 aaKnown RBP eCLIP10.2□□□□□ -0.785e-8■□□□□ 8.9
CTNNA1-243ENST00000540387 RXRAP19793 462 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 YY1P25490 414 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 VHLP40337 213 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 BTDP43251 543 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 DNM2P50570 870 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 SULT2A1Q06520 285 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 HOOK3Q86VS8 718 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 MB21D2Q8IYB1 491 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 USP38Q8NB14 1042 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ABTB1Q969K4 478 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 PPP1R14BQ96C90 147 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 NOX5Q96PH1 765 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 FGFR1OP2Q9NVK5 253 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 TBC1D7Q9P0N9 293 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ARHGAP20Q9P2F6 1191 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 ARL2BPQ9Y2Y0 163 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 MROH7Q68CQ1 1323 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 LTBP3Q9NS15 1303 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 SCN9AQ15858 1988 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 H7C1D1 291 aa10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 AFPP02771 609 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-243ENST00000540387 GNAT2P19087 354 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms