RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 ECHDC2Q86YB7 292 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 BCL7CQ8WUZ0 217 aaPredicted RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 STAMQ92783 540 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 MAP4K1Q92918 833 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 TNPO1Q92973 898 aaKnown RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 GPRASP2Q96D09 838 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 TMEM169Q96HH4 297 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 IGSF21Q96ID5 467 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 PRMT8Q9NR22 394 aaPredicted RBP11.87□□□□□ -0.51
SSPN-207ENST00000540266 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
SSPN-207ENST00000540266 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
SSPN-207ENST00000540266 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
SSPN-207ENST00000540266 FAM170BA6NMN3 283 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 GDF9O60383 454 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 GPR32O75388 356 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 RETP07949 1114 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 CNPP09543 421 aaKnown RBP11.86□□□□□ -0.51
SSPN-207ENST00000540266 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 KLRC1P26715 233 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 MAGEA9P43362 315 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 NT5C2P49902 561 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 GPC5P78333 572 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 TRAF1Q13077 416 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 FZD5Q13467 585 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 SNW1Q13573 536 aaKnown RBP11.86□□□□□ -0.51
SSPN-207ENST00000540266 CSRP2Q16527 193 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 TSSK4Q6SA08 328 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 CDHR1Q96JP9 859 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 RIOX1Q9H6W3 641 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 HELLSQ9NRZ9 838 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 SEMA4GQ9NTN9 838 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
SSPN-207ENST00000540266 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 CLUHO75153 1309 aa11.86□□□□□ -0.51
SSPN-207ENST00000540266 CNOT1A5YKK6 2376 aaKnown RBP11.85□□□□□ -0.51
SSPN-207ENST00000540266 NBEAQ8NFP9 2946 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 C1QTNF9BB2RNN3 333 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 TRAK2O60296 914 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 C1QTNF9P0C862 333 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 PRKCQQ04759 706 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 SLC44A4Q53GD3 710 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 PRR23CQ6ZRP0 262 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 IQCA1Q86XH1 822 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 CELF5Q8N6W0 485 aaKnown RBP11.85□□□□□ -0.51
SSPN-207ENST00000540266 ZNF707Q96C28 371 aaPredicted RBP11.85□□□□□ -0.51
SSPN-207ENST00000540266 IPO9Q96P70 1041 aaKnown RBP11.85□□□□□ -0.51
SSPN-207ENST00000540266 PIGSQ96S52 555 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
SSPN-207ENST00000540266 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 PCDHB13Q9Y5F0 798 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 NUMBLQ9Y6R0 609 aa11.85□□□□□ -0.51
SSPN-207ENST00000540266 SMG1Q96Q15 3661 aaKnown RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 WDFY3Q8IZQ1 3526 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 PIK3CDO00329 1044 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 MEIS2O14770 477 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 CYTH3O43739 400 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 GALTP07902 379 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 KLRC2P26717 231 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 KIZQ2M2Z5 673 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 OSMRQ99650 979 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 MRPL9Q9BYD2 267 aaKnown RBP11.84□□□□□ -0.51
SSPN-207ENST00000540266 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 LTB4R2Q9NPC1 389 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 ZSWIM5Q9P217 1185 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
SSPN-207ENST00000540266 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 MAFGO15525 162 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 ATG7O95352 703 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 PSEN1P49768 467 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 STAT5BP51692 787 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 LIMK1P53667 647 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
SSPN-207ENST00000540266 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
SSPN-207ENST00000540266 ST13P5Q8NFI4 369 aaPredicted RBP11.83□□□□□ -0.52
SSPN-207ENST00000540266 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms