RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 FAM155AB1AL88 458 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CLSTN1O94985 981 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 FTCDO95954 541 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 MRPS35P82673 323 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 ROR2Q01974 943 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 PPP2R5BQ15173 497 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 DENND2CQ68D51 928 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 TRPM8Q7Z2W7 1104 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 RNF168Q8IYW5 571 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 DPH5Q9H2P9 285 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 SRRM3A6NNA2 597 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 SESN3P58005 492 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 PPP4CP60510 307 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 PRKCZQ05513 592 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CUL1Q13616 776 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CDC37Q16543 378 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 TAOK1Q7L7X3 1001 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 ARHGAP22Q7Z5H3 698 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 AGAP11Q8TF27 550 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 TMBIM4Q9HC24 238 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 KLHL14Q9P2G3 628 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 ATP8A1Q9Y2Q0 1164 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 CASP8AP2Q9UKL3 1982 aa9.39□□□□□ -0.91
DDB1-217ENST00000540166 BAZ2BQ9UIF8 2168 aaKnown RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 COL11A2P13942 1736 aaPredicted RBP9.39□□□□□ -0.91
DDB1-217ENST00000540166 CCDC169A6NNP5 214 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 PDE4DQ08499 809 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 ZNF658Q5TYW1 1059 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 CREG2Q8IUH2 290 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 AP5M1Q9H0R1 490 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM153AQ9UHL3 310 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 PDS5AQ29RF7 1337 aaKnown RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 RTN2O75298 545 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 GSTA1P08263 222 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 ALAS1P13196 640 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 SARSP49591 514 aaKnown RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 TFAP4Q01664 338 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 KLC1Q07866 573 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM110CQ1W6H9 321 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 MIS18BP1Q6P0N0 1132 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 SEPT14Q6ZU15 432 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 NAF1Q96HR8 494 aaKnown RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 FGD4Q96M96 766 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 P2RX7Q99572 595 aaKnown RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 AGPAT5Q9NUQ2 364 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 RABGAP1Q9Y3P9 1069 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 TIAM2Q8IVF5 1701 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 CYP2D7A0A087X1C5 515 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 KRIT1O00522 736 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FOXP2O15409 715 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 MGRN1O60291 552 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 HMGCRP04035 888 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 GLI1P08151 1106 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 CCL5P13501 91 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 CALML3P27482 149 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 CDK8P49336 464 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 ATN1P54259 1190 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 RAD23BP54727 409 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 ITGB3BPQ13352 177 aaPredicted RBP9.38□□□□□ -0.91
DDB1-217ENST00000540166 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDB1-217ENST00000540166 HEATR3Q7Z4Q2 680 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 DAAM2Q86T65 1068 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 FBXL5Q9UKA1 691 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 GAKO14976 1311 aa9.38□□□□□ -0.91
DDB1-217ENST00000540166 INHAP05111 366 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
DDB1-217ENST00000540166 COPB2P35606 906 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 PDE6CP51160 858 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 ITIH3Q06033 890 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 FAM47CQ5HY64 1035 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 SLFN13Q68D06 897 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 TMEM154Q6P9G4 183 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 CROCCP2Q86T23 111 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 IQCKQ8N0W5 287 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 KIF2BQ8N4N8 673 aa9.37□□□□□ -0.91
DDB1-217ENST00000540166 IQCDQ96DY2 449 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms