RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 RSPH1Q8WYR4 309 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 SCLT1Q96NL6 688 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 RIT2Q99578 217 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 TRAIPQ9BWF2 469 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 ZBP1Q9H171 429 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 MYO10Q9HD67 2058 aa22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 MYH9P35579 1960 aaKnown RBP22.52■■□□□ 1.2
LPCAT3-210ENST00000540090 MSH4O15457 936 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 CSDE1O75534 798 aaKnown RBP22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 WEE2P0C1S8 567 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 IRX6P78412 446 aaPredicted RBP22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 TBC1D8BQ0IIM8 1120 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 GIT2Q14161 759 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 UGCGQ16739 394 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 RARS2Q5T160 578 aaKnown RBP22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 KIAA1841Q6NSI8 718 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 C12orf76Q8N812 135 aaPredicted RBP22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 SMOC2Q9H3U7 446 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 DZANK1Q9NVP4 752 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 LIMD1Q9UGP4 676 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 USTQ9Y2C2 406 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 DMDP11532 3685 aa22.51■■□□□ 1.19
LPCAT3-210ENST00000540090 CARNS1A5YM72 827 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 ASGR2P07307 311 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 CTSAP10619 480 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 SFNP31947 248 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 CA8P35219 290 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 PHKA2P46019 1235 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 USP11P51784 963 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 POLGP54098 1239 aaPredicted RBP22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 DRP2Q13474 957 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 BMP2KLQ5H9B9 411 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 DDX53Q86TM3 631 aaKnown RBP22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 TMEM173Q86WV6 379 aaPredicted RBP22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 PLCD3Q8N3E9 789 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 BICD2Q8TD16 824 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 SLC22A17Q8WUG5 538 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 SLC5A5Q92911 643 aa22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 NIFKQ9BYG3 293 aaKnown RBP22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 GCOM2Q9BZD3 368 aaPredicted RBP22.5■■□□□ 1.19
LPCAT3-210ENST00000540090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 FGD1P98174 961 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 ASTLQ6HA08 431 aaPredicted RBP22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 TDRD5Q8NAT2 981 aaKnown RBP22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 TMEM87AQ8NBN3 555 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 AUTS2Q8WXX7 1259 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 IGSF21Q96ID5 467 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 CCDC136Q96JN2 1154 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 CEP89Q96ST8 783 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 UNC45AQ9H3U1 944 aa22.49■■□□□ 1.19
LPCAT3-210ENST00000540090 IGKV6-21A0A0C4DH24 114 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 GAS7O60861 476 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 ZC3H11AO75152 810 aaKnown RBP eCLIP22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 GALTP07902 379 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 SKIP12755 728 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 EPCAMP16422 314 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 NBL1P41271 181 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 CLCN5P51795 746 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 JAK3P52333 1124 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 ASCL5Q7RTU5 278 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 NRDE2Q9H7Z3 1164 aa22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 DBR1Q9UK59 544 aaKnown RBP22.48■■□□□ 1.19
LPCAT3-210ENST00000540090 CHMP2AO43633 222 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 ZNF623O75123 536 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 STBD1O95210 358 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 LRCH2Q5VUJ6 765 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 Q6ZUG5 572 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 RDM1Q8NG50 284 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 LPPQ93052 612 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 PHKBQ93100 1093 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 TEKT3Q9BXF9 490 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 TBC1D13Q9NVG8 400 aa22.47■■□□□ 1.19
LPCAT3-210ENST00000540090 RIF1Q5UIP0 2472 aaKnown RBP22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 A0A087WZ62 844 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 OFD1O75665 1012 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 PSMD10O75832 226 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 CPA1P15085 419 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 DNM2P50570 870 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 AKAP17AQ02040 695 aaKnown RBP22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 NTRK3Q16288 839 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 MTERF2Q49AM1 385 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 XKR3Q5GH77 459 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 NOMO2Q5JPE7 1267 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 TWF2Q6IBS0 349 aaKnown RBP22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 GLB1LQ6UWU2 654 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 CCDC148Q8NFR7 591 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 GJA10Q969M2 543 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 FDXACB1Q9BRP7 624 aaPredicted RBP22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 INO80BQ9C086 356 aaPredicted RBP22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 CYP26B1Q9NR63 512 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 FAM105AQ9NUU6 356 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 NID2Q14112 1375 aa22.46■■□□□ 1.19
LPCAT3-210ENST00000540090 SFPQP23246 707 aaKnown RBP eCLIP22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 B3GNT9Q6UX72 402 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 TMC5Q6UXY8 1006 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 CABP7Q86V35 215 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 ZNF410Q86VK4 478 aa22.45■■□□□ 1.18
LPCAT3-210ENST00000540090 PPFIBP1Q86W92 1011 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms