RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SMIM35A0A1B0GVV1 85 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CCDC192P0DO97 292 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 TMOD1P28289 359 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 NMT1P30419 496 aaKnown RBP20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 NPTX2P47972 431 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 PTPN11Q06124 597 aaPredicted RBP20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 KSR1Q8IVT5 923 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 FAM178BQ8IXR5 827 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 KIAA0319LQ8IZA0 1049 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 CTAGE1Q96RT6 745 aa20.89■□□□□ 0.94
TNFRSF1A-213ENST00000540022 ARVCFO00192 962 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 CASP5P51878 434 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 LAMTOR4Q0VGL1 99 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 DMP1Q13316 513 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 STX1AQ16623 288 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 LRSAM1Q6UWE0 723 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 IFT74Q96LB3 600 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 FAM49AQ9H0Q0 323 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PRO3102Q9H379 93 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MRPL44Q9H9J2 332 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ANO10Q9NW15 660 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 CD44P16070 742 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 CDK7P50613 346 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 CAPSQ13938 189 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MXD4Q14582 209 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 RHPN2Q8IUC4 686 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 DNAJB3Q8WWF6 145 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SPIRE2Q8WWL2 714 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MAP7D2Q96T17 732 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NTPCRQ9BSD7 190 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ANP32EQ9BTT0 268 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 KIFC3Q9BVG8 833 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TRMT13Q9NUP7 481 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ZMYND8Q9ULU4 1186 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MAPK8IP1Q9UQF2 711 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 AKT3Q9Y243 479 aa20.88■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ADGRA3Q8IWK6 1321 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 CCDC169A6NNP5 214 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SLC16A4O15374 487 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 VTNP04004 478 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MYBP10242 640 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NAMPTP43490 491 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NCKAP1LP55160 1127 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PTGISQ16647 500 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ZNF720Q7Z2F6 126 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ZNF668Q96K58 619 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 KMT5AQ9NQR1 393 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PCDH10Q9P2E7 1040 aa20.87■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PPP1R3GB7ZBB8 358 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 RBAK-RBAKDNI3L0D1 243 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 K7ENM7 598 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ASAP2O43150 1006 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 GCNT3O95395 438 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MAPTP10636 758 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PRCPP42785 496 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SNX17Q15036 470 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PPP2R5AQ15172 486 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TRIM60Q495X7 471 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ZC2HC1CQ53FD0 456 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TAF2Q6P1X5 1199 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 C11orf57Q6ZUT1 292 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 EPM2AIP1Q7L775 607 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SERINC5Q86VE9 423 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MLKLQ8NB16 471 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 RNF149Q8NC42 400 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 WNT8BQ93098 351 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PPP1R16BQ96T49 567 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 GTPBP4Q9BZE4 634 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 DNAJC25Q9H1X3 360 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SZT2Q5T011 3432 aa20.86■□□□□ 0.93
TNFRSF1A-213ENST00000540022 LRRIQ4A6NIV6 560 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PPP1R37O75864 691 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SYN1P17600 705 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SMTNP53814 917 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ANO6Q4KMQ2 910 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 HAUS6Q7Z4H7 955 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ADSSL1Q8N142 457 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TMEM161BQ8NDZ6 487 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SCFD1Q8WVM8 642 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NLRP4Q96MN2 994 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 STRA6Q9BX79 667 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 SEZ6LQ9BYH1 1024 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TRPV6Q9H1D0 765 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ARHGAP28Q9P2N2 729 aa20.85■□□□□ 0.93
TNFRSF1A-213ENST00000540022 B4GALT4O60513 344 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PRPF6O94906 941 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 GPC3P51654 580 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TMEM62Q0P6H9 643 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 COBLL1Q53SF7 1204 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ST6GALNAC4Q9H4F1 302 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 KCNG1Q9UIX4 513 aa20.84■□□□□ 0.93
TNFRSF1A-213ENST00000540022 LTBP2Q14767 1821 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 PQBP1O60828 265 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NLRP11P59045 1033 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 KCNA1Q09470 495 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TFDP1Q14186 410 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 FAM126BQ8IXS8 530 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 MYOCDQ8IZQ8 938 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms