RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KIFC3Q9BVG8 833 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 STRA6Q9BX79 667 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 CDK11BP21127 795 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 NAMPTP43490 491 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 CLCN3P51790 818 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 GTF2BQ00403 316 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 TMEM161BQ8NDZ6 487 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 NOC3LQ8WTT2 800 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 PRPF31Q8WWY3 499 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 SRRTQ9BXP5 876 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 SETD4Q9NVD3 440 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 SUCLA2Q9P2R7 463 aaPredicted RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 LRRIQ4A6NIV6 560 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 H0YCG3 227 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 AP5Z1O43299 807 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 ZNF18P17022 549 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 CST5P28325 142 aaPredicted RBP17.78■□□□□ 0.44
TRAF3-204ENST00000539721 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
TRAF3-204ENST00000539721 ZCWPW2Q504Y3 356 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 CDKAL1Q5VV42 579 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 FOXR2Q6PJQ5 311 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 SYCP3Q8IZU3 236 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 ACCSQ96QU6 501 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 TYW1Q9NV66 732 aaKnown RBP17.78■□□□□ 0.44
TRAF3-204ENST00000539721 NRCAMQ92823 1304 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 ZMYM2Q9UBW7 1377 aa17.78■□□□□ 0.44
TRAF3-204ENST00000539721 SIP14410 1827 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 DENND3A2RUS2 1198 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 PDXKO00764 312 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.44
TRAF3-204ENST00000539721 TMOD1P28289 359 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 CAPSQ13938 189 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 KCNA10Q16322 511 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 SARM1Q6SZW1 724 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 RNF180Q86T96 592 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 PCSK9Q8NBP7 692 aaKnown RBP17.77■□□□□ 0.44
TRAF3-204ENST00000539721 LMBR1Q8WVP7 490 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 THAP9Q9H5L6 903 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 TMEM206Q9H813 350 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 TRAF3IP3Q9Y228 551 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.44
TRAF3-204ENST00000539721 FGFR1OPO95684 399 aaKnown RBP17.76■□□□□ 0.43
TRAF3-204ENST00000539721 ASGR1P07306 291 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 ABCD1P33897 745 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 LAMTOR4Q0VGL1 99 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 SLC9C1Q4G0N8 1177 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 RHPN2Q8IUC4 686 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 LINC01465Q8N7H1 131 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 C7orf31Q8N865 590 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 TRIM5Q9C035 493 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.435e-6■■■■■ 32.4
TRAF3-204ENST00000539721 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 ARHGAP28Q9P2N2 729 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 TBX20Q9UMR3 447 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 ASAP2O43150 1006 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 HSPA8P11142 646 aaKnown RBP17.76■□□□□ 0.43
TRAF3-204ENST00000539721 FANCCQ00597 558 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 FKBP3Q00688 224 aaKnown RBP17.76■□□□□ 0.43
TRAF3-204ENST00000539721 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 CCSAPQ6IQ19 270 aaPredicted RBP17.76■□□□□ 0.43
TRAF3-204ENST00000539721 NFRKBQ6P4R8 1299 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 HS2ST1Q7LGA3 356 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 FAM114A1Q8IWE2 563 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 EXOC7Q9UPT5 735 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 AKT3Q9Y243 479 aa17.76■□□□□ 0.43
TRAF3-204ENST00000539721 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 KCNJ18B7U540 433 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 TGFB1I1O43294 461 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 ADCY5O95622 1261 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 SERPINC1P01008 464 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 SCP2P22307 547 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 SPAG1Q07617 926 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 TFDP1Q14186 410 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 KCNJ12Q14500 433 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 LHX8Q68G74 356 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 MAP4K3Q8IVH8 894 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
TRAF3-204ENST00000539721 MAGEC2Q9UBF1 373 aaPredicted RBP17.75■□□□□ 0.43
TRAF3-204ENST00000539721 GJB1P08034 283 aa17.74■□□□□ 0.43
TRAF3-204ENST00000539721 GNAT1P11488 350 aa17.74■□□□□ 0.43
TRAF3-204ENST00000539721 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
TRAF3-204ENST00000539721 NBPF20Q3BBV1 942 aa17.74■□□□□ 0.43
TRAF3-204ENST00000539721 LRRC55Q6ZSA7 311 aa17.74■□□□□ 0.43
TRAF3-204ENST00000539721 RNF149Q8NC42 400 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms