RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 ARHGAP20Q9P2F6 1191 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 COL11A1P12107 1806 aaPredicted RBP11.11□□□□□ -0.63
SPARC-209ENST00000539687 SMCHD1A6NHR9 2005 aa11.11□□□□□ -0.63
SPARC-209ENST00000539687 SCN4AP35499 1836 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 GLTPD2A6NH11 291 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 BACH1O14867 736 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 CLIC2O15247 247 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 ATG7O95352 703 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 UCHL3P15374 230 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 PON1P27169 355 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 STAT1P42224 750 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 MAGEA1P43355 309 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 HERVK_113P62684 666 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 FKBP1BP68106 108 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 CCNA1P78396 465 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 KLHL30Q0D2K2 578 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 RAPGEF1Q13905 1077 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 ABHD15Q6UXT9 468 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 NCAPG2Q86XI2 1143 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 MAP4K3Q8IVH8 894 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 DAW1Q8N136 415 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 UBE2Q2Q8WVN8 375 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
SPARC-209ENST00000539687 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 KMT5AQ9NQR1 393 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 ZNF302Q9NR11 478 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 NRBP2Q9NSY0 501 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
SPARC-209ENST00000539687 BTNL10A8MVZ5 291 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 EPHB6O15197 1021 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 TADA3O75528 432 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 NOL4O94818 638 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 PRLRP16471 622 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 MCM3P25205 808 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 GTF2H1P32780 548 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 FMO5P49326 533 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 VAMP7P51809 220 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 PEX3P56589 373 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 MYL7Q01449 175 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 PRKCEQ02156 737 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 KCTD2Q14681 263 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 UGCGQ16739 394 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 ASTE1Q2TB18 679 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 SWSAP1Q6NVH7 229 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 NOX5Q96PH1 765 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 NLRC4Q9NPP4 1024 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 CYP26B1Q9NR63 512 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 MAFBQ9Y5Q3 323 aaPredicted RBP11.09□□□□□ -0.63
SPARC-209ENST00000539687 SAR1BQ9Y6B6 198 aa11.09□□□□□ -0.63
SPARC-209ENST00000539687 PTPRFP10586 1907 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CTAGE15A4D2H0 777 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CCDC169A6NNP5 214 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 ZBTB39O15060 712 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 RGS20O76081 388 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 OATP04181 439 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CTAGE8P0CG41 777 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 TCP1P17987 556 aaKnown RBP11.08□□□□□ -0.64
SPARC-209ENST00000539687 GARTP22102 1010 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CASP4P49662 377 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 SLC26A2P50443 739 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CYP2J2P51589 502 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
SPARC-209ENST00000539687 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 KCNA1Q09470 495 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 FSTL1Q12841 308 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 STRN3Q13033 797 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
SPARC-209ENST00000539687 PAPD7Q5XG87 772 aaKnown RBP11.08□□□□□ -0.64
SPARC-209ENST00000539687 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 METTL7BQ6UX53 244 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 ANO5Q75V66 913 aa11.08□□□□□ -0.64
SPARC-209ENST00000539687 CTAGE6Q86UF2 777 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms