RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 SCLT1Q96NL6 688 aa11.93□□□□□ -0.5
HMGA2-209ENST00000539662 NACC1Q96RE7 527 aa11.93□□□□□ -0.5
HMGA2-209ENST00000539662 RGS18Q9NS28 235 aa11.93□□□□□ -0.5
HMGA2-209ENST00000539662 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
HMGA2-209ENST00000539662 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
HMGA2-209ENST00000539662 MEIS3P2A8K0S8 358 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 LAD1O00515 517 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 DGAT1O75907 488 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 XRCC6P12956 609 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 MARCKSP29966 332 aaPredicted RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 FAM189BP81408 668 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 GRB10Q13322 594 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 CAPSQ13938 189 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 FOXD4L6Q3SYB3 417 aaPredicted RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 LONRF3Q496Y0 759 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 SPECC1Q5M775 1068 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 PADI6Q6TGC4 694 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 FOXD4L3Q6VB84 417 aaPredicted RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 ERMNQ8TAM6 284 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 PSPC1Q8WXF1 523 aaKnown RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 YME1L1Q96TA2 773 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 FTHL17Q9BXU8 183 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 GCOM2Q9BZD3 368 aaPredicted RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
HMGA2-209ENST00000539662 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 ATP6V0A4Q9HBG4 840 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 INSL6Q9Y581 213 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 ATG2AQ2TAZ0 1938 aa11.92□□□□□ -0.5
HMGA2-209ENST00000539662 SPTBN5Q9NRC6 3674 aaKnown RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 DENND3A2RUS2 1198 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 FGFR1P11362 822 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 FOSL2P15408 326 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 ATF7P17544 494 aaPredicted RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 ERVK-21P61565 698 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 JPH2Q9BR39 696 aaPredicted RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 FBXO2Q9UK22 296 aaPredicted RBP11.91□□□□□ -0.5
HMGA2-209ENST00000539662 PPME1Q9Y570 386 aa11.91□□□□□ -0.5
HMGA2-209ENST00000539662 PRRC2BQ5JSZ5 2229 aaKnown RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 ARHGEF35A5YM69 484 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 B4GALT5O43286 388 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 EDN1P05305 212 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CYP11B2P19099 503 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 IGFBP4P22692 258 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 HOXA11P31270 313 aaPredicted RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 PTENP60484 403 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CCDC85BQ15834 202 aaPredicted RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 HAUS3Q68CZ6 603 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 SLC24A5Q71RS6 500 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CATSPER4Q7RTX7 472 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CDR2LQ86X02 465 aaPredicted RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 DAW1Q8N136 415 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 PPM1EQ8WY54 764 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 LPPQ93052 612 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CPB2Q96IY4 423 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 EPSTI1Q96J88 318 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 CSRNP2Q9H175 543 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 PRDM6Q9NQX0 595 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 ZDHHC9Q9Y397 364 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
HMGA2-209ENST00000539662 UNC80Q8N2C7 3258 aa11.9□□□□□ -0.5
HMGA2-209ENST00000539662 ADGRA3Q8IWK6 1321 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 NPHP3-ACAD11A0A0J9YXS1 232 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 EYA4O95677 639 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 MBTD1Q05BQ5 628 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 RAD51AP2Q09MP3 1159 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 MAPK7Q13164 816 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 KARSQ15046 597 aaKnown RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 AMHR2Q16671 573 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 TMEM119Q4V9L6 283 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 EPC2Q52LR7 807 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 HYIQ5T013 277 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 RINT1Q6NUQ1 792 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 LRRC55Q6ZSA7 311 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 ZNF598Q86UK7 904 aaKnown RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 CABP7Q86V35 215 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 RNF169Q8NCN4 708 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms