RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PADI3Q9ULW8 664 aa14.1□□□□□ -0.15
TSPAN9-207ENST00000539631 A0A1B0GVL5 298 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 RPS6KA5O75582 802 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 ACTN1P12814 892 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 DARSP14868 501 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 FGFR4P22455 802 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 EIF4BP23588 611 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 CMA1P23946 247 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 GUCY2CP25092 1073 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 MAPK7Q13164 816 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 PAK2Q13177 524 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 E2F4Q16254 413 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 TDHQ8IZJ6 230 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 DAW1Q8N136 415 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 HERVK_113Q902F9 699 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 DHX58Q96C10 678 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 IFT122Q9HBG6 1241 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 ST3GAL5Q9UNP4 418 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 GBF1Q92538 1859 aa14.09□□□□□ -0.15
TSPAN9-207ENST00000539631 SFI1A8K8P3 1242 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 ZBBXA8MT70 800 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 POLR2DO15514 142 aaKnown RBP14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 PFKFB1P16118 471 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 IKBKEQ14164 716 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 TFDP1Q14186 410 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 SV2BQ7L1I2 683 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 STAMQ92783 540 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 KIFAP3Q92845 792 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 APBB2Q92870 758 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 TIPINQ9BVW5 301 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 TMX1Q9H3N1 280 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 KCND2Q9NZV8 630 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 KCNH3Q9ULD8 1083 aa14.08□□□□□ -0.16
TSPAN9-207ENST00000539631 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 LRRIQ4A6NIV6 560 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 GPR182O15218 404 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 BAIAP3O94812 1187 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 PTENP60484 403 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 GIT2Q14161 759 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 ODR4Q5SWX8 454 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 DRC1Q96MC2 740 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 INO80BQ9C086 356 aaPredicted RBP14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 GOLPH3LQ9H4A5 285 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 MINDY3Q9H8M7 445 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
TSPAN9-207ENST00000539631 FAM237AA0A1B0GTK4 181 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 MYMKA6NI61 221 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 MGEA5O60502 916 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 KRT18P05783 430 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 NAMPTP43490 491 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 PHKA2P46019 1235 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 NDUFA8P51970 172 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 PEX3P56589 373 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 WDR5P61964 334 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 POU5F1BQ06416 359 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 PPP2R5AQ15172 486 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 DYMQ7RTS9 669 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 RTN4RL1Q86UN2 441 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 LINC01599Q8WXQ3 324 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 MRPS27Q92552 414 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 IFT74Q96LB3 600 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 KIFC3Q9BVG8 833 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 MTIF3Q9H2K0 278 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 CUEDC2Q9H467 287 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 SERTAD1Q9UHV2 236 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 ODF2LQ9ULJ1 636 aa14.06□□□□□ -0.16
TSPAN9-207ENST00000539631 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 A0A1W2PPC1 479 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 CCDC169A6NNP5 214 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 INO80B-WBP1J3KQ70 363 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 ENPP3O14638 875 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 NPTX2P47972 431 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 DEFB103AP81534 67 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 MBTD1Q05BQ5 628 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 CDCA2Q69YH5 1023 aaPredicted RBP14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 CATSPER4Q7RTX7 472 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 SLC17A8Q8NDX2 589 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 DEPTORQ8TB45 409 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 DDX12PQ92771 950 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
TSPAN9-207ENST00000539631 FTHL17Q9BXU8 183 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms