RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 LMBR1Q8WVP7 490 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 BSNDQ8WZ55 320 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 KIFC3Q9BVG8 833 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 KMT5AQ9NQR1 393 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 OLFML3Q9NRN5 406 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 SETD4Q9NVD3 440 aa15.6■□□□□ 0.09
CD4-208ENST00000538827 C17orf102A2RUQ5 167 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 LRRIQ4A6NIV6 560 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 KBTBD13C9JR72 458 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 HAS3O00219 553 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 SLC16A4O15374 487 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 PRPF6O94906 941 aaKnown RBP15.59■□□□□ 0.09
CD4-208ENST00000538827 KIF20AO95235 890 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 KLRC1P26715 233 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 TPM4P67936 248 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 NKX3-2P78367 333 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 TPD52L1Q16890 204 aaPredicted RBP15.59■□□□□ 0.09
CD4-208ENST00000538827 EFCAB12Q6NXP0 572 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 MTHFD1LQ6UB35 978 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 KLHDC9Q8NEP7 349 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 DEPTORQ8TB45 409 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 PSPC1Q8WXF1 523 aaKnown RBP15.59■□□□□ 0.09
CD4-208ENST00000538827 VTI1AQ96AJ9 217 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 PPP1R16BQ96T49 567 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 BPIFA3Q9BQP9 254 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 PDLIM7Q9NR12 457 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 SUCLA2Q9P2R7 463 aaPredicted RBP15.59■□□□□ 0.09
CD4-208ENST00000538827 PCDHA2Q9Y5H9 948 aa15.59■□□□□ 0.09
CD4-208ENST00000538827 TRIM49BA6NDI0 452 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 RRN3P2A6NIE6 340 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 MAGEB2O15479 319 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 GLRA2P23416 452 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 DNM2P50570 870 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 SMTNP53814 917 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 MYL5Q02045 173 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 DRP2Q13474 957 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 PPP2R5AQ15172 486 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 IER5Q5VY09 327 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.08
CD4-208ENST00000538827 P2RX5Q93086 422 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 DEFB118Q96PH6 123 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 MAP7D2Q96T17 732 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 TSG101Q99816 390 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 HDAC6Q9UBN7 1215 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 AKT3Q9Y243 479 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 UBE4BO95155 1302 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 NRCAMQ92823 1304 aa15.58■□□□□ 0.08
CD4-208ENST00000538827 BICDL2A1A5D9 508 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 SMTNL1A8MU46 457 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 EIF3DO15371 548 aaKnown RBP eCLIP15.57■□□□□ 0.08
CD4-208ENST00000538827 TFRCP02786 760 aaKnown RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 TMOD1P28289 359 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 ERCC5P28715 1186 aaPredicted RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 ARL2P36404 184 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 NAMPTP43490 491 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 NPTX2P47972 431 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 ACLYP53396 1101 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 NCKAP1LP55160 1127 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 ALCAMQ13740 583 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 CAPSQ13938 189 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 IQCB1Q15051 598 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 NBPF20Q3BBV1 942 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 ZC2HC1CQ53FD0 456 aaPredicted RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 LHX8Q68G74 356 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 NFRKBQ6P4R8 1299 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 RHPN2Q8IUC4 686 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 DHX40Q8IX18 779 aaKnown RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 TDHQ8IZJ6 230 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 DHTKD1Q96HY7 919 aaPredicted RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 ZNF668Q96K58 619 aaPredicted RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 NLRP4Q96MN2 994 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 SCLT1Q96NL6 688 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 FAM49AQ9H0Q0 323 aaPredicted RBP15.57■□□□□ 0.08
CD4-208ENST00000538827 GRPEL1Q9HAV7 217 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 RWDD2AQ9UIY3 292 aa15.57■□□□□ 0.08
CD4-208ENST00000538827 IGKV6-21A0A0C4DH24 114 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 FSD2A1L4K1 749 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 MOXD2PA6NHM9 499 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 MAPTP10636 758 aaKnown RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 CYP2C9P11712 490 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 CCNE1P24864 410 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 RTP1P59025 263 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 TFDP1Q14186 410 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 CT47A1Q5JQC4 288 aaPredicted RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 EPM2AIP1Q7L775 607 aaPredicted RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 HAUS6Q7Z4H7 955 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 SYCP3Q8IZU3 236 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 ARRDC4Q8NCT1 418 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 PRPF31Q8WWY3 499 aaKnown RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 C17orf75Q9HAS0 396 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 PAK6Q9NQU5 681 aaPredicted RBP15.56■□□□□ 0.08
CD4-208ENST00000538827 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
CD4-208ENST00000538827 ADGRA3Q8IWK6 1321 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms