RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TYW1Q9NV66 732 aaKnown RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 IL9P15248 144 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 ATF7P17544 494 aaPredicted RBP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TXKP42681 527 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 EMC2Q15006 297 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 SAFBQ15424 915 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 NAALADL2Q58DX5 795 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 XKR9Q5GH70 373 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 CLLU1OSQ5K130 101 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 ADGRD2Q7Z7M1 963 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 ZNF410Q86VK4 478 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TPH2Q8IWU9 490 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 FBXO18Q8NFZ0 1043 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 CASD1Q96PB1 797 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TMEM117Q9H0C3 514 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TMEM60Q9H2L4 133 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 IGFLR1Q9H665 355 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 ZSWIM4Q9H7M6 989 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
RAB40B-202ENST00000538809 PCDHA12Q9UN75 941 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 PCDHB12Q9Y5F1 795 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 COL4A3BPQ9Y5P4 624 aa16.73■□□□□ 0.27
RAB40B-202ENST00000538809 C5orf42Q9H799 3197 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 POTEMA6NI47 508 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 LINC01565O15544 149 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 MCM7P33993 719 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 PBX3P40426 434 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 RFC5P40937 340 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 COL19A1Q14993 1142 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 CLUL1Q15846 466 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 PTCRAQ6ISU1 281 aaPredicted RBP16.72■□□□□ 0.27
RAB40B-202ENST00000538809 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 CATSPER4Q7RTX7 472 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 ABI1Q8IZP0 508 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 NEK9Q8TD19 979 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 HELQQ8TDG4 1101 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 PSPC1Q8WXF1 523 aaKnown RBP16.72■□□□□ 0.27
RAB40B-202ENST00000538809 MTMR9Q96QG7 549 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
RAB40B-202ENST00000538809 PIN4Q9Y237 131 aaKnown RBP16.72■□□□□ 0.27
RAB40B-202ENST00000538809 HOXA2O43364 376 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 SLITRK3O94933 977 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 LAG3P18627 525 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 LTBRP36941 435 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 CDC42EP1Q00587 391 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 LONRF3Q496Y0 759 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
RAB40B-202ENST00000538809 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 ZNF598Q86UK7 904 aaKnown RBP16.71■□□□□ 0.27
RAB40B-202ENST00000538809 LRRC43Q8N309 656 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 PRPF31Q8WWY3 499 aaKnown RBP16.71■□□□□ 0.27
RAB40B-202ENST00000538809 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
RAB40B-202ENST00000538809 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 DACT1Q9NYF0 836 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 MYH11P35749 1972 aa16.71■□□□□ 0.27
RAB40B-202ENST00000538809 A0A087WWV3 80 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 A0A0U1RQF3 1178 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 ST18O60284 1047 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 TBX10O75333 385 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 FGF18O76093 207 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 SRGAP2CP0DJJ0 459 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 DLX2Q07687 328 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-202ENST00000538809 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 FAM184AQ8NB25 1140 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 LPPQ93052 612 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 MTRQ99707 1265 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 INO80BQ9C086 356 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-202ENST00000538809 MINDY3Q9H8M7 445 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 XPNPEP1Q9NQW7 623 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
RAB40B-202ENST00000538809 PHKA2P46019 1235 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 NRIP1P48552 1158 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
RAB40B-202ENST00000538809 ZNF174Q15697 407 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 CTC1Q2NKJ3 1217 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
RAB40B-202ENST00000538809 EXOC8Q8IYI6 725 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 TMX3Q96JJ7 454 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 CCDC43Q96MW1 224 aaKnown RBP16.69■□□□□ 0.26
RAB40B-202ENST00000538809 HSD17B14Q9BPX1 270 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
RAB40B-202ENST00000538809 CD320Q9NPF0 282 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 TLR9Q9NR96 1032 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 CHST12Q9NRB3 414 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 AGPAT5Q9NUQ2 364 aa16.69■□□□□ 0.26
RAB40B-202ENST00000538809 TRIP11Q15643 1979 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 MEIS3P2A8K0S8 358 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 NCK2O43639 380 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 GAS2O43903 313 aaKnown RBP16.68■□□□□ 0.26
RAB40B-202ENST00000538809 LYPLA2O95372 231 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 EOMESO95936 686 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 U2AF2P26368 475 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms