RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 RAD9AQ99638 391 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 NT5C3AQ9H0P0 336 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 CSRNP2Q9H175 543 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 POLR3FQ9H1D9 316 aaPredicted RBP14.66□□□□□ -0.06
COPS7A-207ENST00000538375 TMX1Q9H3N1 280 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 ZNF576Q9H609 170 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 GPRC5CQ9NQ84 441 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 LRFN2Q9ULH4 789 aa14.66□□□□□ -0.06
COPS7A-207ENST00000538375 SRPRBQ9Y5M8 271 aaKnown RBP14.66□□□□□ -0.06
COPS7A-207ENST00000538375 SPTBN5Q9NRC6 3674 aaKnown RBP14.66□□□□□ -0.06
COPS7A-207ENST00000538375 GJB5O95377 273 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 CA3P07451 260 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 CYP11B2P19099 503 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 SFPQP23246 707 aaKnown RBP eCLIP14.65□□□□□ -0.06
COPS7A-207ENST00000538375 PHKA2P46019 1235 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 GRB10Q13322 594 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 PPP2R2DQ66LE6 453 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 KRI1Q8N9T8 703 aaKnown RBP14.65□□□□□ -0.06
COPS7A-207ENST00000538375 YME1L1Q96TA2 773 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 COL25A1Q9BXS0 654 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-207ENST00000538375 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-207ENST00000538375 INSL6Q9Y581 213 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 PCDHB7Q9Y5E2 793 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 EYSQ5T1H1 3165 aa14.65□□□□□ -0.06
COPS7A-207ENST00000538375 LRRIQ4A6NIV6 560 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 SPTLC2O15270 562 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 MGEA5O60502 916 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
COPS7A-207ENST00000538375 GLRA2P23416 452 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 TXLNAP40222 546 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 KARSQ15046 597 aaKnown RBP14.64□□□□□ -0.07
COPS7A-207ENST00000538375 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 SRGAP1Q7Z6B7 1085 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
COPS7A-207ENST00000538375 ASAP3Q8TDY4 903 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 LINC01599Q8WXQ3 324 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 EPSTI1Q96J88 318 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 PANK2Q9BZ23 570 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-207ENST00000538375 CERS4Q9HA82 394 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 IFT122Q9HBG6 1241 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 RGS18Q9NS28 235 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 C1orf112Q9NSG2 853 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 CCDC39Q9UFE4 941 aa14.64□□□□□ -0.07
COPS7A-207ENST00000538375 LCHNA4D1U4 455 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 INO80B-WBP1J3KQ70 363 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 STAG3L1P0CL83 205 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 LIG1P18858 919 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 DNM1Q05193 864 aaKnown RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 NCBP1Q09161 790 aaKnown RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 RAD51AP2Q09MP3 1159 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 HYIQ5T013 277 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 LINC00301Q8NCQ3 95 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 IFT74Q96LB3 600 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 TTYH1Q9H313 450 aaPredicted RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 CFAP45Q9UL16 551 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 PIN4Q9Y237 131 aaKnown RBP14.63□□□□□ -0.07
COPS7A-207ENST00000538375 SIP14410 1827 aa14.63□□□□□ -0.07
COPS7A-207ENST00000538375 SLC26A4O43511 780 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 ERLIN2O94905 339 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 BRD1O95696 1058 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 SARSP49591 514 aaKnown RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 PTENP60484 403 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 CAPSQ13938 189 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 TWF2Q6IBS0 349 aaKnown RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 RINT1Q6NUQ1 792 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 FAM43BQ6ZT52 329 aaPredicted RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 USP49Q70CQ1 688 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 SYT2Q8N9I0 419 aaPredicted RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 SYMPKQ92797 1274 aaKnown RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 CCSER1Q9C0I3 900 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
COPS7A-207ENST00000538375 DACT1Q9NYF0 836 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 ZDHHC9Q9Y397 364 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 LOXHD1Q8IVV2 1947 aa14.62□□□□□ -0.07
COPS7A-207ENST00000538375 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 SFI1A8K8P3 1242 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 HIP1RO75146 1068 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 PPP6R2O75170 966 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 YEATS4O95619 227 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 KRT18P05783 430 aaKnown RBP14.61□□□□□ -0.07
COPS7A-207ENST00000538375 PLCG1P19174 1290 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 ME1P48163 572 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 DSC3Q14574 896 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 GRIN2CQ14957 1233 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 PPP2R5AQ15172 486 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 TMEM132AQ24JP5 1023 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 TMEM119Q4V9L6 283 aa14.61□□□□□ -0.07
COPS7A-207ENST00000538375 PAN2Q504Q3 1202 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms