RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 KRT76Q01546 638 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 DRAP1Q14919 205 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 XRRA1Q6P2D8 792 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 VSIG10LQ86VR7 867 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 DNAAF5Q86Y56 855 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 LRRC57Q8N9N7 239 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 INPP4AQ96PE3 977 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 WRNIP1Q96S55 665 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 APEX2Q9UBZ4 518 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 DMGDHQ9UI17 866 aaKnown RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 DAAM1Q9Y4D1 1078 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 ARID2Q68CP9 1835 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 DOCK5Q9H7D0 1870 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 EIF3JO75822 258 aaKnown RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 CFAP221Q4G0U5 840 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 HAUS6Q7Z4H7 955 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 VPS36Q86VN1 386 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 RDH13Q8NBN7 331 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 LNX1Q8TBB1 728 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 CBWD1Q9BRT8 395 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 ANKEF1Q9NU02 776 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 PPP1R1BQ9UD71 204 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 ZNF214Q9UL59 606 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-208ENST00000538333 INTUQ9ULD6 942 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 OAZ1P54368 228 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 NCKAP1LP55160 1127 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 DLG4P78352 724 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 CCDC70Q6NSX1 233 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 INTS8Q75QN2 995 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 GPRASP2Q96D09 838 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 SENP7Q9BQF6 1050 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 LCTP09848 1927 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 A0A0A6YYK5 440 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 N4BP1O75113 896 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 NR3C2P08235 984 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 CCND2P30279 289 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 DSG3P32926 999 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 HMGCS2P54868 508 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 NPEPPSP55786 919 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 MCCD1P59942 119 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 GPS2Q13227 327 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 ANGEL2Q5VTE6 544 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PLA2G4FQ68DD2 849 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 ANO5Q75V66 913 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 ZNF771Q7L3S4 317 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 AENQ8WTP8 325 aaKnown RBP15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PCIF1Q9H4Z3 704 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 UTRNP46939 3433 aa15.25■□□□□ 0.03
LIMK1-208ENST00000538333 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 CES2O00748 559 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 MAPK13O15264 365 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 ZBTB48P10074 688 aaPredicted RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 KRT13P13646 458 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 RFX1P22670 979 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 PEX3P56589 373 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SNRPFP62306 86 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 PPP3CAQ08209 521 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 ZNF746Q6NUN9 644 aaPredicted RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 TPCN2Q8NHX9 752 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SGIP1Q9BQI5 828 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 MOV10L1Q9BXT6 1211 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 HSPBP1Q9NZL4 362 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SLC16A4O15374 487 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 MAFGO15525 162 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 RGS20O76081 388 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 KCNA2P16389 499 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 AARSP49588 968 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 VAMP7P51809 220 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 TMEM132BQ14DG7 1078 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 IFI16Q16666 785 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SLFN11Q7Z7L1 901 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 XXYLT1Q8NBI6 393 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 PLEKHO2Q8TD55 490 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 U2AF1L4Q8WU68 220 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms