RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PGK2P07205 417 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 NR3C2P08235 984 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 VEGFAP15692 232 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 CLCN1P35523 988 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 LMNB2Q03252 620 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 NBPF12Q5TAG4 269 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 CROCCP2Q86T23 111 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 BBOF1Q8ND07 529 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PGBD4Q96DM1 585 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 DCCP43146 1447 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ADM5C9JUS6 153 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 POLRMTO00411 1230 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 INHBAP08476 426 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SRGNP10124 158 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 IQCB1Q15051 598 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 STOX1Q6ZVD7 989 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 RAB44Q7Z6P3 723 aaPredicted RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 NDUFAF2Q8N183 169 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SEPT1Q8WYJ6 367 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ARHGEF2Q92974 986 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 TAAR1Q96RJ0 339 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 NMT1P30419 496 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 PRCPP42785 496 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 C2orf54Q08AI8 447 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 KRT31Q15323 416 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 EFCAB12Q6NXP0 572 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 PLEKHH3Q7Z736 793 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 DDX53Q86TM3 631 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 SLC35F6Q8N357 371 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SPDYE1Q8NFV5 336 aaPredicted RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 PPP2R3CQ969Q6 453 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 IFT43Q96FT9 208 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 EPB41L4AQ9HCS5 686 aaPredicted RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 SPATA31D1Q6ZQQ2 1576 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ZBED1O96006 694 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 TCP1P17987 556 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 GNA15P30679 374 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 NNMTP40261 264 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 CASP2P42575 452 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 OR1G1P47890 313 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 GUCY2DQ02846 1103 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SLC10A5Q5PT55 438 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 LRRC31Q6UY01 552 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 TTC25Q96NG3 672 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 GOLPH3LQ9H4A5 285 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ADAM22Q9P0K1 906 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 FZD1Q9UP38 647 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 C17orf102A2RUQ5 167 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 C2CD2LO14523 706 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ITGA4P13612 1032 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 PMLP29590 882 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 THPOP40225 353 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SATB1Q01826 763 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ADCY1Q08828 1119 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 DCAF4L1Q3SXM0 396 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 DEPDC1BQ8WUY9 529 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 MMTAG2Q9BU76 263 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 GLIS2Q9BZE0 524 aaPredicted RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 TUFT1Q9NNX1 390 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 GPR75-ASB3A0A0A6YYF3 556 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 PRKCEQ02156 737 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 C10orf76Q5T2E6 689 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SPATA24Q86W54 205 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 RUNDC3BQ96NL0 473 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 SEPT5Q99719 369 aaPredicted RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 SPZ1Q9BXG8 430 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 INTS2Q9H0H0 1204 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 MAP2P11137 1827 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 PRRG1O14668 218 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 IKBKBO14920 756 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 HMBSP08397 361 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 RALAP11233 206 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 CYP2C9P11712 490 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 CAP2P40123 477 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 CXCL9Q07325 125 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 EMC2Q15006 297 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 PPP2R5EQ16537 467 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 BTBD8Q5XKL5 378 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 EXT2Q93063 718 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 MCUR1Q96AQ8 359 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ZNF560Q96MR9 790 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 OLA1Q9NTK5 396 aaKnown RBP5.75□□□□□ -1.49
LRP6-203ENST00000538239 HACD3Q9P035 362 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 IQGAP1P46940 1657 aa5.75□□□□□ -1.49
LRP6-203ENST00000538239 ECEL1O95672 775 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ACOT2P49753 483 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 RCAN1P53805 252 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PAN2Q504Q3 1202 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 KIAA1755Q5JYT7 1200 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 HAUS6Q7Z4H7 955 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 VSIG1Q86XK7 387 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PPP1R13BQ96KQ4 1090 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 SIK2Q9H0K1 926 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 FBXO28Q9NVF7 368 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TSR3Q9UJK0 312 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 ANAPC7Q9UJX3 599 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 SCINQ9Y6U3 715 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms