RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 STAMQ92783 540 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 MAP7D2Q96T17 732 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 REEP2Q9BRK0 252 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 IFIH1Q9BYX4 1025 aaKnown RBP14.54□□□□□ -0.08
CHFR-216ENST00000538235 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 HPSEQ9Y251 543 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 A0A1B0GVL5 298 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 MYMKA6NI61 221 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 B4GALT5O43286 388 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 GADD45BO75293 160 aaPredicted RBP14.53□□□□□ -0.08
CHFR-216ENST00000538235 SSBP05455 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHFR-216ENST00000538235 SRGAP2CP0DJJ0 459 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 PFKFB1P16118 471 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 FAM102BQ5T8I3 360 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 IER5Q5VY09 327 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 PSRC1Q6PGN9 363 aaPredicted RBP14.53□□□□□ -0.08
CHFR-216ENST00000538235 RSPH3Q86UC2 560 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 GPBP1Q86WP2 473 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 GRAMD1CQ8IYS0 662 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 CRIPAKQ8N1N5 446 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 PSPC1Q8WXF1 523 aaKnown RBP14.53□□□□□ -0.08
CHFR-216ENST00000538235 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
CHFR-216ENST00000538235 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
CHFR-216ENST00000538235 FIZ1Q96SL8 496 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 FGFBP2Q9BYJ0 223 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 CFAP45Q9UL16 551 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 ST3GAL5Q9UNP4 418 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 DNM3Q9UQ16 869 aa14.53□□□□□ -0.08
CHFR-216ENST00000538235 RALGAPA2Q2PPJ7 1873 aa14.52□□□□□ -0.08
CHFR-216ENST00000538235 FAM237AA0A1B0GTK4 181 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 SLC26A4O43511 780 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 ACTN4O43707 911 aaKnown RBP14.52□□□□□ -0.09
CHFR-216ENST00000538235 FGBP02675 491 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 GUCY2CP25092 1073 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 PBX2P40425 430 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
CHFR-216ENST00000538235 IFNLR1Q8IU57 520 aaPredicted RBP14.52□□□□□ -0.09
CHFR-216ENST00000538235 NLRP7Q8WX94 980 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 DHX58Q96C10 678 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 LRCH3Q96II8 777 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 CDK5RAP3Q96JB5 506 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 CCDC113Q9H0I3 377 aa14.52□□□□□ -0.09
CHFR-216ENST00000538235 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 PLXNA4Q9HCM2 1894 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 GAS2O43903 313 aaKnown RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 RPS6KA5O75582 802 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 PFKMP08237 780 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 MYOGP15173 224 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 EIF4BP23588 611 aaKnown RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 TMOD1P28289 359 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 GATMP50440 423 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 NDUFA8P51970 172 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 RABGGTBP53611 331 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 PTENP60484 403 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 GIT2Q14161 759 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 ZNF410Q86VK4 478 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 MCPH1Q8NEM0 835 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 IKZF4Q9H2S9 585 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 RNF19AQ9NV58 838 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 STK17AQ9UEE5 414 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
CHFR-216ENST00000538235 STK24Q9Y6E0 443 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
CHFR-216ENST00000538235 LCHNA4D1U4 455 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 MEIS3P2A8K0S8 358 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 M0QZ92 97 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 TSPAN1O60635 241 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 HOXA11P31270 313 aaPredicted RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 STAT6P42226 847 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 ZNF131P52739 623 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 NFX1Q12986 1120 aaKnown RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 PAK2Q13177 524 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 HABP4Q5JVS0 413 aaKnown RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 UBXN11Q5T124 520 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 RRAGBQ5VZM2 374 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 ADALQ6DHV7 355 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 CDR2LQ86X02 465 aaPredicted RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 RPUSD2Q8IZ73 545 aaKnown RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 GLIS3Q8NEA6 775 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 TCP11Q8WWU5 503 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 SEPT8Q92599 483 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 JPH2Q9BR39 696 aaPredicted RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 RC3H2Q9HBD1 1191 aaKnown RBP14.5□□□□□ -0.09
CHFR-216ENST00000538235 SERTAD1Q9UHV2 236 aa14.5□□□□□ -0.09
CHFR-216ENST00000538235 CITO14578 2027 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 LRRIQ4A6NIV6 560 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 ZBBXA8MT70 800 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 ENPP3O14638 875 aa14.49□□□□□ -0.09
CHFR-216ENST00000538235 POLR2DO15514 142 aaKnown RBP14.49□□□□□ -0.09
CHFR-216ENST00000538235 PARNO95453 639 aaKnown RBP14.49□□□□□ -0.09
CHFR-216ENST00000538235 RPLP2P05387 115 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms