RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 SEMA3FQ13275 785 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 MYMKA6NI61 221 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 CCDC197Q8NCU1 140 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 SKA2Q8WVK7 121 aaPredicted RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 CHP1Q99653 195 aa13.16□□□□□ -0.3
CIT-208ENST00000537607 JPH1Q9HDC5 661 aaPredicted RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 CPSF3Q9UKF6 684 aaKnown RBP13.16□□□□□ -0.3
CIT-208ENST00000537607 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PDXKO00764 312 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PFDN6O15212 129 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 NOL3O60936 208 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 MT-ND3P03897 115 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 MMP19Q99542 508 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 SLC12A6Q9UHW9 1150 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PSMD14O00487 310 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 WDR46O15213 610 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 CUL1Q13616 776 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 SPATS2Q86XZ4 545 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 NR1D1P20393 614 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 GPC3P51654 580 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 BIRC2Q13490 618 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PYROXD1Q8WU10 500 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 LPAR1Q92633 364 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 TYW5A2RUC4 315 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 GPC4O75487 556 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PLCB4Q15147 1175 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 GSPT2Q8IYD1 628 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 CFAP61Q8NHU2 1237 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 NUF2Q9BZD4 464 aa13.15□□□□□ -0.3
CIT-208ENST00000537607 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
CIT-208ENST00000537607 MEGF6O75095 1541 aa13.15□□□□□ -0.31
CIT-208ENST00000537607 DIP2BQ9P265 1576 aa13.15□□□□□ -0.31
CIT-208ENST00000537607 RHOBTB3O94955 611 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 TJP3O95049 919 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 STAT5BP51692 787 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
CIT-208ENST00000537607 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 WDR24Q96S15 920 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 CA4P22748 312 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
CIT-208ENST00000537607 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 UBE4BO95155 1302 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 PODXLO00592 558 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 HUS1O60921 280 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 NR3C2P08235 984 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 GNA15P30679 374 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 GYS2P54840 703 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 ASPHQ12797 758 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 FRMD5Q7Z6J6 570 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 RYBPQ8N488 228 aaPredicted RBP13.14□□□□□ -0.31
CIT-208ENST00000537607 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 TXNP10599 105 aaKnown RBP13.14□□□□□ -0.31
CIT-208ENST00000537607 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
CIT-208ENST00000537607 CLNS1AP54105 237 aaKnown RBP13.14□□□□□ -0.31
CIT-208ENST00000537607 CENPUQ71F23 418 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 HDAC11Q96DB2 347 aa13.14□□□□□ -0.31
CIT-208ENST00000537607 PPP4CP60510 307 aa13.13□□□□□ -0.31
CIT-208ENST00000537607 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
CIT-208ENST00000537607 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms