RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 FAM173BQ6P4H8 233 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 FAM43BQ6ZT52 329 aaPredicted RBP19.26■□□□□ 0.67
GPN3-202ENST00000537466 MAFAQ8NHW3 353 aaPredicted RBP19.26■□□□□ 0.67
GPN3-202ENST00000537466 ASAP3Q8TDY4 903 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 MINDY3Q9H8M7 445 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
GPN3-202ENST00000537466 KIAA1024Q9UPX6 916 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 ASAP2O43150 1006 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 STX6O43752 255 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 IGFBP4P22692 258 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 ARL2P36404 184 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
GPN3-202ENST00000537466 KRT79Q5XKE5 535 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
GPN3-202ENST00000537466 MAEAQ7L5Y9 396 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 RNF149Q8NC42 400 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 GPRC5CQ9NQ84 441 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 LRFN2Q9ULH4 789 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 MYH11P35749 1972 aa19.25■□□□□ 0.67
GPN3-202ENST00000537466 PRUNE2Q8WUY3 3088 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 LPXNO60711 386 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 LINC00271P0C7V0 271 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 ZSCAN20P17040 1043 aaPredicted RBP19.24■□□□□ 0.67
GPN3-202ENST00000537466 SFPQP23246 707 aaKnown RBP eCLIP19.24■□□□□ 0.67
GPN3-202ENST00000537466 FAM189BP81408 668 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 FIBCD1Q8N539 461 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 INO80BQ9C086 356 aaPredicted RBP19.24■□□□□ 0.67
GPN3-202ENST00000537466 POLR3FQ9H1D9 316 aaPredicted RBP19.24■□□□□ 0.67
GPN3-202ENST00000537466 PCDHB7Q9Y5E2 793 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 CLIC4Q9Y696 253 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
GPN3-202ENST00000537466 PRRC2BQ5JSZ5 2229 aaKnown RBP19.23■□□□□ 0.67
GPN3-202ENST00000537466 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 E9PMD0 336 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 GLRA2P23416 452 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 GRB10Q13322 594 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 CAPSQ13938 189 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 BTG3Q14201 252 aaPredicted RBP19.23■□□□□ 0.67
GPN3-202ENST00000537466 MXD4Q14582 209 aaPredicted RBP19.23■□□□□ 0.67
GPN3-202ENST00000537466 PAN2Q504Q3 1202 aaKnown RBP19.23■□□□□ 0.67
GPN3-202ENST00000537466 FAM102BQ5T8I3 360 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 CATSPER4Q7RTX7 472 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 SRGAP1Q7Z6B7 1085 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 BHMT2Q9H2M3 363 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 PLXNA4Q9HCM2 1894 aa19.23■□□□□ 0.67
GPN3-202ENST00000537466 GRIN1Q05586 938 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 SPRYD3Q8NCJ5 442 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 TMEM161AQ9NX61 479 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 PIN4Q9Y237 131 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 HSP90AA1P07900 732 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 FGFR1P11362 822 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 CYP11B2P19099 503 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 PTENP60484 403 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 PTPAQ15257 358 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 ZRSR1Q15695 479 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 TMEM192Q8IY95 271 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 CMTR2Q8IYT2 770 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 MCPH1Q8NEM0 835 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 FBXO22Q8NEZ5 403 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 PNMA5Q96PV4 448 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 ELAC1Q9H777 363 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 POLD4Q9HCU8 107 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 CHST12Q9NRB3 414 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 AGPAT5Q9NUQ2 364 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 MTCH2Q9Y6C9 303 aa19.22■□□□□ 0.67
GPN3-202ENST00000537466 MRPL42Q9Y6G3 142 aaKnown RBP19.22■□□□□ 0.67
GPN3-202ENST00000537466 A0A0U1RQF3 1178 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 EYA4O95677 639 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 BMP15O95972 392 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 ATF7P17544 494 aaPredicted RBP19.21■□□□□ 0.67
GPN3-202ENST00000537466 PHKA2P46019 1235 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 TFDP1Q14186 410 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 HYIQ5T013 277 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 IFNLR1Q8IU57 520 aaPredicted RBP19.21■□□□□ 0.67
GPN3-202ENST00000537466 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 CLP1Q92989 425 aaKnown RBP19.21■□□□□ 0.67
GPN3-202ENST00000537466 SAMD11Q96NU1 681 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 PLIN2Q99541 437 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 RNF19AQ9NV58 838 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 DACT1Q9NYF0 836 aa19.21■□□□□ 0.67
GPN3-202ENST00000537466 TBKBP1A7MCY6 615 aa19.2■□□□□ 0.66
GPN3-202ENST00000537466 POU3F3P20264 500 aaPredicted RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 CEBPZQ03701 1054 aaKnown RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 POU5F1BQ06416 359 aa19.2■□□□□ 0.66
GPN3-202ENST00000537466 CCDC85BQ15834 202 aaPredicted RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 ZNF598Q86UK7 904 aaKnown RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 BSNDQ8WZ55 320 aa19.2■□□□□ 0.66
GPN3-202ENST00000537466 ZSCAN16Q9H4T2 348 aaPredicted RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
GPN3-202ENST00000537466 DNM3Q9UQ16 869 aa19.2■□□□□ 0.66
GPN3-202ENST00000537466 INO80B-WBP1J3KQ70 363 aa19.19■□□□□ 0.66
GPN3-202ENST00000537466 HOXA11P31270 313 aaPredicted RBP19.19■□□□□ 0.66
GPN3-202ENST00000537466 CTNNB1P35222 781 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms