RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 PSMA2P25787 234 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 BASP1P80723 227 aaKnown RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 PTPAQ15257 358 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 DARS2Q6PI48 645 aaKnown RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 RBAKQ9NYW8 714 aaPredicted RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 GGPS1O95749 300 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 ZNF18P17022 549 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 FBXO38Q6PIJ6 1188 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 GSDMBQ8TAX9 411 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 CALR3Q96L12 384 aaKnown RBP12.23□□□□□ -0.45
TNC-211ENST00000537320 RILPQ96NA2 401 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 ZWILCHQ9H900 591 aa12.23□□□□□ -0.45
TNC-211ENST00000537320 ANO9A1A5B4 782 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 ECE1P42892 770 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 XKR3Q5GH77 459 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 PDXDC1Q6P996 788 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
TNC-211ENST00000537320 GLYCTKQ8IVS8 523 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 ATG4CQ96DT6 458 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 MYOM1P52179 1685 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNC-211ENST00000537320 IL1R1P14778 569 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNC-211ENST00000537320 KIAA1841Q6NSI8 718 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 RNF149Q8NC42 400 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 DAGLBQ8NCG7 672 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 MCUR1Q96AQ8 359 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 RASSF4Q9H2L5 321 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
TNC-211ENST00000537320 DGAT1O75907 488 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 ACTN1P12814 892 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 SAT1P21673 171 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 CACNA2D3Q8IZS8 1091 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 MXRA8Q9BRK3 442 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 MIF4GDA9UHW6 222 aaKnown RBP12.22□□□□□ -0.45
TNC-211ENST00000537320 INHBAP08476 426 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
TNC-211ENST00000537320 CDKL2Q92772 493 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 LCMT1Q9UIC8 334 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 NFU1Q9UMS0 254 aa12.22□□□□□ -0.45
TNC-211ENST00000537320 CCDC188H7C350 402 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 NCK2O43639 380 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 FTLP02792 175 aaPredicted RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 RPA1P27694 616 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 IFNAR2P48551 515 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 MAP7Q14244 749 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 BBS5Q8N3I7 341 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 FMO2Q99518 471 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 EDEM3Q9BZQ6 932 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 KLHL14Q9P2G3 628 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 SLC37A4O43826 429 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 ATP11AP98196 1134 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 ADCY1Q08828 1119 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 CASP8Q14790 479 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 NTRK3Q16288 839 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 TKFCQ3LXA3 575 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 KCNV1Q6PIU1 500 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 RNF10Q8N5U6 811 aaKnown RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 ARHGEF2Q92974 986 aaKnown RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 CHP1Q99653 195 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 ATP8B3O60423 1300 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 DDTLA6NHG4 134 aaPredicted RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 MYBP10242 640 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 TBXAS1P24557 533 aaPredicted RBP12.21□□□□□ -0.45
TNC-211ENST00000537320 CAP2P40123 477 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 NCAPGQ9BPX3 1015 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 HDAC6Q9UBN7 1215 aa12.21□□□□□ -0.45
TNC-211ENST00000537320 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.46
TNC-211ENST00000537320 SLCO1A2P46721 670 aa12.21□□□□□ -0.46
TNC-211ENST00000537320 PRPSAP1Q14558 356 aa12.21□□□□□ -0.46
TNC-211ENST00000537320 NR1I3Q14994 352 aa12.21□□□□□ -0.46
TNC-211ENST00000537320 HSPH1Q92598 858 aa12.21□□□□□ -0.46
TNC-211ENST00000537320 INPP5FQ9Y2H2 1132 aa12.21□□□□□ -0.46
TNC-211ENST00000537320 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 SOX5P35711 763 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 RASSF2P50749 326 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 FXR1P51114 621 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNC-211ENST00000537320 PLA2G4FQ68DD2 849 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 WHAMMQ8TF30 809 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 RIT2Q99578 217 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 KCNH7Q9NS40 1196 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 INTS9Q9NV88 658 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 HSPBP1Q9NZL4 362 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms