RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CHP1Q99653 195 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NT5C3AQ9H0P0 336 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MRPL46Q9H2W6 279 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ARHGEF3Q9NR81 526 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 METP08581 1390 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 GPR75-ASB3A0A0A6YYF3 556 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 GGPS1O95749 300 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 OR52Z1P0C646 297 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NPEPPSP55786 919 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EIF6P56537 245 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 C1orf146Q5VVC0 180 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MYCT1Q8N699 235 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PLBD2Q8NHP8 589 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MDM1Q8TC05 714 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 OXER1Q8TDS5 423 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TLCD1Q96CP7 247 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 LRMDAQ9H2I8 198 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MMADHCQ9H3L0 296 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 RAB20Q9NX57 234 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 DNAJB4Q9UDY4 337 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ARMCX3Q9UH62 379 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ASB3Q9Y575 518 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EXOC1LA0A1B0GW35 172 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 BTBD19C9JJ37 291 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ATP5BP06576 529 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 VIL1P09327 827 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 BCRP11274 1271 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 FGFR4P22455 802 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 RGS2P41220 211 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SRRM1Q8IYB3 904 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MARCH10Q8NA82 808 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 USP38Q8NB14 1042 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 IL17REQ8NFR9 667 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 JDP2Q8WYK2 163 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TIMMDC1Q9NPL8 285 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NDE1Q9NXR1 346 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MYO5BQ9ULV0 1848 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 AKAP12Q02952 1782 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 WNT7AO00755 349 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 DAPK3O43293 454 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SCG2P13521 617 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 HSD17B3P37058 310 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CARSP49589 748 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CAV1Q03135 178 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF844Q08AG5 666 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EZH2Q15910 746 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 SGO2Q562F6 1265 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 OGFOD1Q8N543 542 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EPAS1Q99814 870 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 C2CD2Q9Y426 696 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TCP11X1B4DZS4 312 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PPP1R3GB7ZBB8 358 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TFRCP02786 760 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 YWHAGP61981 247 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 CDR2Q01850 454 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC63Q05C16 580 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 EXOC3L4Q17RC7 722 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 MFSD5Q6N075 450 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TRMT10CQ7L0Y3 403 aaKnown RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 RIBC1Q8N443 379 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 BBOF1Q8ND07 529 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PIGOQ8TEQ8 1089 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 PPP4R1Q8TF05 950 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 ATP8B4Q8TF62 1192 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 NLRP7Q8WX94 980 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM51Q9BSJ1 452 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 DISP2A7MBM2 1401 aa5.78□□□□□ -1.48
PTPRD-213ENST00000537002 LDHCP07864 332 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SERPINB3P29508 390 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CYLC2Q14093 348 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RABL6Q3YEC7 729 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 KAZNQ674X7 775 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RNF43Q68DV7 783 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CROCCP3Q8IVE0 287 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 OSBP2Q969R2 916 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PABPC3Q9H361 631 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TTC7AQ9ULT0 858 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PCDHGA4Q9Y5G9 962 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 DCCP43146 1447 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CFAP69A5D8W1 941 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 STRNO43815 780 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 KRT10P13645 584 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CA8P35219 290 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 BNIP1Q12981 228 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF211Q13398 564 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 FAM26FQ5R3K3 315 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 THEMIS2Q5TEJ8 643 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 AGAP11Q8TF27 550 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PUS7LQ9H0K6 701 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC87Q9NVE4 849 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CHMP2BQ9UQN3 213 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TRAF3IP3Q9Y228 551 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SLC1A4P43007 532 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms