RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MEIS1O00470 390 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 MAP3K13O43283 966 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 KCNA3P22001 575 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 ZNF76P36508 570 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 HSD17B3P37058 310 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
LIG1-203ENST00000536218 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 ELAC2Q9BQ52 826 aaKnown RBP15.14■□□□□ 0.01
LIG1-203ENST00000536218 GDF3Q9NR23 364 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 C2CD2Q9Y426 696 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 RNF8O76064 485 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 BAG6P46379 1132 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 RIPK1Q13546 671 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 CNOT6LQ96LI5 555 aaKnown RBP15.14■□□□□ 0.01
LIG1-203ENST00000536218 SEMA6BQ9H3T3 888 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 STK17AQ9UEE5 414 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
LIG1-203ENST00000536218 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 ECEL1O95672 775 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 CCND1P24385 295 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 ITIH3Q06033 890 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 KRT71Q3SY84 523 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 GLIS2Q9BZE0 524 aaPredicted RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 TNFRSF8P28908 595 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
LIG1-203ENST00000536218 ZNF844Q08AG5 666 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 RUFY4Q6ZNE9 571 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 GMCL1P1Q8NEA9 526 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 FAM81AQ8TBF8 368 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 SELENOSQ9BQE4 189 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 TMEM165Q9HC07 324 aa15.13■□□□□ 0.01
LIG1-203ENST00000536218 IGF2BP3O00425 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIG1-203ENST00000536218 ZNF263O14978 683 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 NQO1P15559 274 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIG1-203ENST00000536218 FAM151AQ8WW52 585 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 NOC4LQ9BVI4 516 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 THAP9Q9H5L6 903 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 FBXO28Q9NVF7 368 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 AKR1B10O60218 316 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 COQ9O75208 318 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 PPFIA2O75334 1257 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 KRT18P05783 430 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 TUBP50607 506 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 SCNN1BP51168 640 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 STAT2P52630 851 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 CYP4A11Q02928 519 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 CXCL9Q07325 125 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 POTEGQ6S5H5 508 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 POTEEQ6S8J3 1075 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 GORASP1Q9BQQ3 440 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 LGALS16A8MUM7 142 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 FAM86B1E9PN63 330 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 FAM86B2P0C5J1 330 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 CUL3Q13618 768 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 GMLQ99445 158 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 ABCF3Q9NUQ8 709 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 SAMD15Q9P1V8 674 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
LIG1-203ENST00000536218 ZBTB21Q9ULJ3 1066 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 SLC12A4Q9UP95 1085 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 PCDHA13Q9Y5I0 950 aa15.12■□□□□ 0.01
LIG1-203ENST00000536218 LIN7AO14910 233 aaPredicted RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 GALNT15Q8N3T1 639 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 MREGQ8N565 214 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 KLHL29Q96CT2 875 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 ZNRF3Q9ULT6 936 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 MED24O75448 989 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 USP11P51784 963 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 TRPM8Q7Z2W7 1104 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 XPO6Q96QU8 1125 aaKnown RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 GLT8D2Q9H1C3 349 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 ECT2Q9H8V3 914 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 PLCB1Q9NQ66 1216 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 BMP2KQ9NSY1 1161 aaPredicted RBP15.11■□□□□ 0.01
LIG1-203ENST00000536218 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
LIG1-203ENST00000536218 MYH7BA7E2Y1 1941 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 TMEM119Q4V9L6 283 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 NUGGCQ68CJ6 796 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms