RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GTPBP10A4D1E9 387 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 POTEFA5A3E0 1075 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 WTIPA6NIX2 430 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 SIGLEC16A6NMB1 481 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ENO4A6NNW6 628 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TCP11X1B4DZS4 312 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ANKRD63C9JTQ0 380 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 KLRF2D3W0D1 207 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 hCG_1984214I3L0E3 225 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 RASGRF2O14827 1237 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 IRF6O14896 467 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CETN3O15182 167 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TP73O15350 636 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 MAGEB2O15479 319 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ECE2O60344 883 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 AP1G2O75843 785 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 UNC5CO95185 931 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TDP2O95551 362 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GGPS1O95749 300 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 AFPP02771 609 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 USP17L8P0C7I0 530 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 POTEIP0CG38 1075 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 POTEJP0CG39 1038 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TPBGLP0DKB5 382 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ACADSP16219 412 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CREB1P16220 341 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ATP2A2P16615 1042 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CYP11B2P19099 503 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 RASA1P20936 1047 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GNA11P29992 359 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CHRNA3P32297 505 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 HOXD13P35453 343 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 PEX5P50542 639 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 NAPAP54920 295 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 MRPS35P82673 323 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ARID5AQ03989 594 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 MKRN3Q13064 507 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 BMT2Q1RMZ1 405 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 PARP10Q53GL7 1025 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 DDX60LQ5H9U9 1706 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 SPDYAQ5MJ70 313 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 WASHC2DQ5SRD0 308 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 THEMIS2Q5TEJ8 643 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 POTEEQ6S8J3 1075 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 MTHFD1LQ6UB35 978 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TRMT10CQ7L0Y3 403 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 DAAM2Q86T65 1068 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CCDC65Q8IXS2 484 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ZNF713Q8N859 430 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 C12orf50Q8NA57 414 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ASAP3Q8TDY4 903 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 U2AF1L4Q8WU68 220 aaKnown RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 INPP5DQ92835 1189 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 HAS1Q92839 578 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GLG1Q92896 1179 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 SLC7A6OSQ96CW6 309 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ARHGEF26Q96DR7 871 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 TRIM31Q9BZY9 425 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 YIPF3Q9GZM5 350 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GPR88Q9GZN0 384 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 RIOX1Q9H6W3 641 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 KANSL2Q9H9L4 492 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 EURLQ9NYK6 297 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 PARP2Q9UGN5 583 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 LTBP4Q8N2S1 1624 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 PITPNM2Q9BZ72 1349 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 ROBO1Q9Y6N7 1651 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 TMEM120BA0PK00 339 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 POTEMA6NI47 508 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 PODXLO00592 558 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 TRAFD1O14545 582 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 SLC16A3O15427 465 aaKnown RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 ATP5HO75947 161 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 MTA2O94776 668 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 CAMTA2O94983 1202 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 RTN3O95197 1032 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 TTLL1O95922 423 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 T-ENOLP0DO92 83 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 GNAT1P11488 350 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 NEFHP12036 1026 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 GM2AP17900 193 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 TAC1P20366 129 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 SP100P23497 879 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 CNGA1P29973 690 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 FOXN2P32314 431 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 COPB2P35606 906 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 IFNAR2P48551 515 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 CTCFP49711 727 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 PLTPP55058 493 aa7.47□□□□□ -1.21
CPSF7-215ENST00000536145 RRP1BQ14684 758 aaKnown RBP7.47□□□□□ -1.21
CPSF7-215ENST00000536145 MTFR1Q15390 333 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms