RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PCDHGC5Q9Y5F6 944 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 PHIPQ8WWQ0 1821 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 GFPT2O94808 682 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 FTCDO95954 541 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 JAK3P52333 1124 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 HNRNPH2P55795 449 aaKnown RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 DLG4P78352 724 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 KRT76Q01546 638 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 ALKBH5Q6P6C2 394 aaKnown RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 NLGN2Q8NFZ4 835 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 RUBCNQ92622 972 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 CCDC43Q96MW1 224 aaKnown RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 CBWD1Q9BRT8 395 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 TMEM206Q9H813 350 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 GGA3Q9NZ52 723 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 ZMYND10O75800 440 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 RGS20O76081 388 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 SFNP31947 248 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 TNNT3P45378 269 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-202ENST00000535906 XKR9Q5GH70 373 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 HAUS6Q7Z4H7 955 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 ZSWIM2Q8NEG5 633 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 SPATA4Q8NEY3 305 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 TCEAL9Q9UHQ7 104 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 KIAA1217Q5T5P2 1943 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 C19orf81C9J6K1 198 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 F8VZ95 297 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 EVI5O60447 810 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 CCND2P30279 289 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 LMAN1P49257 510 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-202ENST00000535906 PEX3P56589 373 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 GTF2BQ00403 316 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 ALCAMQ13740 583 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 MYBPC2Q14324 1141 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 C10orf76Q5T2E6 689 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 ANO5Q75V66 913 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 ACCSQ96QU6 501 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 GPR88Q9GZN0 384 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 DNAJC12Q9UKB3 198 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 NENFQ9UMX5 172 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 PACSIN2Q9UNF0 486 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-202ENST00000535906 TELO2Q9Y4R8 837 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
VPS33B-202ENST00000535906 GRID2IPA4D2P6 1211 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 DDX3XO00571 662 aaKnown RBP eCLIP14.55□□□□□ -0.089e-12■■□□□ 11.6
VPS33B-202ENST00000535906 SLC16A4O15374 487 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 STAT1P42224 750 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 OAZ1P54368 228 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 MYL7Q01449 175 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
VPS33B-202ENST00000535906 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 XRRA1Q6P2D8 792 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 NLRX1Q86UT6 975 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 OLIG1Q8TAK6 271 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 MS4A14Q96JA4 679 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 INPP4AQ96PE3 977 aaPredicted RBP14.55□□□□□ -0.08
VPS33B-202ENST00000535906 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 MOV10L1Q9BXT6 1211 aaKnown RBP14.55□□□□□ -0.08
VPS33B-202ENST00000535906 STK33Q9BYT3 514 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 INTS2Q9H0H0 1204 aaKnown RBP14.55□□□□□ -0.08
VPS33B-202ENST00000535906 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 BTNL10A8MVZ5 291 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 MYBL2P10244 700 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 FERP16591 822 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 SOX5P35711 763 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 PRKG1Q13976 671 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 FAM102BQ5T8I3 360 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 CCDC181Q5TID7 509 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 LMO3Q8TAP4 145 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 GPRASP2Q96D09 838 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 ANKEF1Q9NU02 776 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 APEX2Q9UBZ4 518 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 PCDHA10Q9Y5I2 948 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
VPS33B-202ENST00000535906 ZC3H4Q9UPT8 1303 aaKnown RBP14.55□□□□□ -0.08
VPS33B-202ENST00000535906 LRRN2O75325 713 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 SYF2O95926 243 aaKnown RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 KCNA2P16389 499 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 MATR3P43243 847 aaKnown RBP eCLIP14.54□□□□□ -0.089e-6■■□□□ 12
VPS33B-202ENST00000535906 DNA2P51530 1060 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 NCKAP1LP55160 1127 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 PHLDB3Q6NSJ2 640 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 ZNF746Q6NUN9 644 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 HDAC7Q8WUI4 952 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 TMEM174Q8WUU8 243 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 LRRC1Q9BTT6 524 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 SELENOOQ9BVL4 669 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
VPS33B-202ENST00000535906 CYP39A1Q9NYL5 469 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 HSPBP1Q9NZL4 362 aa14.54□□□□□ -0.08
VPS33B-202ENST00000535906 POLR2AP24928 1970 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms