RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 PABPC5Q96DU9 382 aaKnown RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 AKT3Q9Y243 479 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 GINS2Q9Y248 185 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 PCDHB7Q9Y5E2 793 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 GRM6O15303 877 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 HOXA2O43364 376 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
CCDC60-202ENST00000535685 KRT2P35908 639 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 FOSBP53539 338 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 UBE3AQ05086 875 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 CAMK1Q14012 370 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 EPHA7Q15375 998 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 TCEAL5Q5H9L2 206 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 EARS2Q5JPH6 523 aaKnown RBP12.11□□□□□ -0.47
CCDC60-202ENST00000535685 ANO5Q75V66 913 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 ZNF410Q86VK4 478 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 LRRC71Q8N4P6 559 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 SPPL3Q8TCT6 385 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
CCDC60-202ENST00000535685 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 EOMESO95936 686 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 ITGB1P05556 798 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 DNM2P50570 870 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 NR5A1Q13285 461 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 LLPHQ9BRT6 129 aaKnown RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 DHX33Q9H6R0 707 aaKnown RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 ATP6V0A4Q9HBG4 840 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 CYP26B1Q9NR63 512 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-202ENST00000535685 LIMCH1Q9UPQ0 1083 aa12.1□□□□□ -0.47
CCDC60-202ENST00000535685 DDX11L8A8MPP1 907 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
CCDC60-202ENST00000535685 LYPLA2O95372 231 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 DRP2Q13474 957 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
CCDC60-202ENST00000535685 ECHDC2Q86YB7 292 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 CWH43Q9H720 699 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 DACT1Q9NYF0 836 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
CCDC60-202ENST00000535685 FAM205CA6NFA0 338 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 JAK2O60674 1132 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 NUDT7P0C024 238 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 KCNA5P22460 613 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 LTBRP36941 435 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 RFC5P40937 340 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 GATMP50440 423 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 HYAL1Q12794 435 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 TRIM29Q14134 588 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 PAN2Q504Q3 1202 aaKnown RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 OTUD6AQ7L8S5 288 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 CASD1Q96PB1 797 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 KIF2CQ99661 725 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 SUCLA2Q9P2R7 463 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 WRAP73Q9P2S5 460 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-202ENST00000535685 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
CCDC60-202ENST00000535685 A0A087WZ62 844 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms