RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 KLHL40Q2TBA0 621 aa17.22■□□□□ 0.35
CNN1-202ENST00000535659 HERC4Q5GLZ8 1057 aaPredicted RBP17.22■□□□□ 0.35
CNN1-202ENST00000535659 ODR4Q5SWX8 454 aa17.22■□□□□ 0.35
CNN1-202ENST00000535659 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
CNN1-202ENST00000535659 CELF4Q9BZC1 486 aaKnown RBP17.22■□□□□ 0.35
CNN1-202ENST00000535659 PCDHA5Q9Y5H7 936 aa17.22■□□□□ 0.35
CNN1-202ENST00000535659 M0QZ92 97 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 KLRC4O43908 158 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 TRAK2O60296 914 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
CNN1-202ENST00000535659 GPC3P51654 580 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 RBL2Q08999 1139 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 FAM26DQ5JW98 314 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 ZNF618Q5T7W0 954 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 RNF149Q8NC42 400 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 SPIRE2Q8WWL2 714 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
CNN1-202ENST00000535659 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 EVPLQ92817 2033 aa17.21■□□□□ 0.35
CNN1-202ENST00000535659 A0A087WZ62 844 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 CCDC169A6NNP5 214 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 PITPNM1O00562 1244 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 CHRNA1P02708 482 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 NAMPTP43490 491 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 NPTX2P47972 431 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 SARSP49591 514 aaKnown RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 SMTNP53814 917 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 DMP1Q13316 513 aaPredicted RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 CAPSQ13938 189 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 ZNF410Q86VK4 478 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 NLRP7Q8WX94 980 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 SMARCE1Q969G3 411 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 NLRP4Q96MN2 994 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 GSDMAQ96QA5 445 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 NOC4LQ9BVI4 516 aaKnown RBP17.21■□□□□ 0.34
CNN1-202ENST00000535659 HIPK3Q9H422 1215 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 TBX21Q9UL17 535 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 GINS2Q9Y248 185 aa17.21■□□□□ 0.34
CNN1-202ENST00000535659 SELPP16109 830 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 EHHADHQ08426 723 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 COASYQ13057 564 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 PSMD2Q13200 908 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 KMT5BQ4FZB7 885 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
CNN1-202ENST00000535659 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 KMT5AQ9NQR1 393 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 CDY2AQ9Y6F7 541 aa17.2■□□□□ 0.34
CNN1-202ENST00000535659 LRRIQ4A6NIV6 560 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 KIAA0355O15063 1070 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 CTSHP09668 335 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 MAPTP10636 758 aaKnown RBP17.19■□□□□ 0.34
CNN1-202ENST00000535659 PTENP60484 403 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 MGAT3Q09327 533 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 KCNB1Q14721 858 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 NT5DC1Q5TFE4 455 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 TRAF7Q6Q0C0 670 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
CNN1-202ENST00000535659 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
CNN1-202ENST00000535659 OLFML3Q9NRN5 406 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 EXOC1Q9NV70 894 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 TBC1D7Q9P0N9 293 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 TMEM63CQ9P1W3 806 aa17.19■□□□□ 0.34
CNN1-202ENST00000535659 TRIM43BA6NCK2 446 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 SLC16A4O15374 487 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 EVI5O60447 810 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 IQCF3P0C7M6 154 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
CNN1-202ENST00000535659 PHKA2P46019 1235 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
CNN1-202ENST00000535659 LRRC8DQ7L1W4 858 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 SRGAP1Q7Z6B7 1085 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
CNN1-202ENST00000535659 DPF3Q92784 378 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 HPS3Q969F9 1004 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 TRIM43Q96BQ3 446 aaPredicted RBP17.18■□□□□ 0.34
CNN1-202ENST00000535659 FIZ1Q96SL8 496 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 OSMRQ99650 979 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 PPP1R12CQ9BZL4 782 aa17.18■□□□□ 0.34
CNN1-202ENST00000535659 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms