RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 TRIM33Q9UPN9 1127 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TRAF3IP3Q9Y228 551 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 THRAP3Q9Y2W1 955 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 DDX60LQ5H9U9 1706 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 KIAA0391O15091 583 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TGFB1I1O43294 461 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 MGRN1O60291 552 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 CACNB3P54284 484 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 GTF2IP78347 998 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 LONRF1Q17RB8 773 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 SEPT14Q6ZU15 432 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 SYCE1Q8N0S2 351 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 CCDC63Q8NA47 563 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 USP40Q9NVE5 1235 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 NENFQ9UMX5 172 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ABCA3Q99758 1704 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ACSL3O95573 720 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TTLL1O95922 423 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ZKSCAN8Q15776 578 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TBC1D10BQ4KMP7 808 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 LACTB2Q53H82 288 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 HYIQ5T013 277 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 MAEAQ7L5Y9 396 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 EIF1ADQ8N9N8 165 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TACO1Q9BSH4 297 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 DDX23Q9BUQ8 820 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 KDM4CQ9H3R0 1056 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 KCNMB3Q9NPA1 279 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 CTNNAL1Q9UBT7 734 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 STK38LQ9Y2H1 464 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ALG6Q9Y672 507 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 EML1O00423 815 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 CALUO43852 315 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 UBOX5O94941 541 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 CLSTN1O94985 981 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SOX5P35711 763 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 MMP13P45452 471 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SPIRE1Q08AE8 756 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 ZC3H3Q8IXZ2 948 aaKnown RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 ANKS4BQ8N8V4 417 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 ANKRD42Q8N9B4 389 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 BANK1Q8NDB2 785 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 GDAP1Q8TB36 358 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 RAB17Q9H0T7 212 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 GRHL1Q9NZI5 618 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SRRM3A6NNA2 597 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 FOXN3O00409 490 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 UPP2O95045 317 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SMARCA1P28370 1054 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 PPATQ06203 517 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 MAPK7Q13164 816 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 MESDQ14696 234 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 TNIP1Q15025 636 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 HOOK3Q86VS8 718 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 FAM186BQ8IYM0 893 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 NSMCE1Q8WV22 266 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 ARHGEF1Q92888 912 aaKnown RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 PWWP2AQ96N64 755 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 SAMD15Q9P1V8 674 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 CTTNBP2NLQ9P2B4 639 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 NARFQ9UHQ1 456 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 PNMA3Q9UL41 463 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-214ENST00000535493 DAGLAQ9Y4D2 1042 aa14.49□□□□□ -0.09
HDAC4-214ENST00000535493 TISP43B9A030 160 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 PDXKO00764 312 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 SNHG28P0DPA3 235 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TNFAIP3P21580 790 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 UBXN2AP68543 259 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 ARHGAP4P98171 946 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TRPM8Q7Z2W7 1104 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 ZFPM1Q8IX07 1006 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 SPICE1Q8N0Z3 855 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 PRELID2Q8N945 189 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 DYDC1Q8WWB3 177 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 GPR88Q9GZN0 384 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 C6orf229H3BNL8 230 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 MEIS2O14770 477 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 C21orf2O43822 256 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TBCAO75347 108 aaKnown RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 NEBLO76041 1014 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 GH1P01241 217 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TRIP13Q15645 432 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 FOXR2Q6PJQ5 311 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 AGAP11Q8TF27 550 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 CNOT10Q9H9A5 744 aaKnown RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
HDAC4-214ENST00000535493 TRPC6Q9Y210 931 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms