RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 KIAA1671Q9BY89 1806 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 C9IYK1 514 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 C5orf67F2Z3F1 127 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 H3BNC9 293 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 DLL1O00548 723 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 GAS2O43903 313 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 OR52Z1P0C646 297 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 LINC00271P0C7V0 271 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 ZSCAN20P17040 1043 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 GATMP50440 423 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 GPM6BQ13491 265 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 EMC2Q15006 297 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 ATXN2LQ8WWM7 1075 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 CLP1Q92989 425 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 MRPL38Q96DV4 380 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 C11orf84Q9BUA3 381 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
CDCA3-204ENST00000535406 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
CDCA3-204ENST00000535406 FNDC1Q4ZHG4 1894 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 A0A087WZ62 844 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 SLITRK3O94933 977 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 LYPLA2O95372 231 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 RB1P06400 928 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 FGFR4P22455 802 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 BMPR1AP36894 532 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 DSC3Q14574 896 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 ZNF174Q15697 407 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 TIGD5Q53EQ6 642 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 ERMNQ8TAM6 284 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 MTRQ99707 1265 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 HSD17B14Q9BPX1 270 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 PLVAPQ9BX97 442 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 ELAC1Q9H777 363 aaKnown RBP10.54□□□□□ -0.72
CDCA3-204ENST00000535406 ATP6V0A4Q9HBG4 840 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 TMEM161AQ9NX61 479 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 DACT1Q9NYF0 836 aa10.54□□□□□ -0.72
CDCA3-204ENST00000535406 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 ZBTB39O15060 712 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 HOXA2O43364 376 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 FGFR1P11362 822 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 GJB2P29033 226 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 TECP42680 631 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
CDCA3-204ENST00000535406 AAK1Q2M2I8 961 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 SPOUT1Q5T280 376 aaKnown RBP10.53□□□□□ -0.72
CDCA3-204ENST00000535406 MCTP1Q6DN14 999 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 SYMPKQ92797 1274 aaKnown RBP10.53□□□□□ -0.72
CDCA3-204ENST00000535406 TMEM143Q96AN5 459 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 ANKEF1Q9NU02 776 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 COG5Q9UP83 839 aa10.53□□□□□ -0.72
CDCA3-204ENST00000535406 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
CDCA3-204ENST00000535406 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-204ENST00000535406 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.72
CDCA3-204ENST00000535406 H3BQV1 296 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 DGAT1O75907 488 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 RARRES1P49788 294 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 FAM189BP81408 668 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 TFF2Q03403 129 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 LAMTOR4Q0VGL1 99 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 FAM102BQ5T8I3 360 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 HAUS3Q68CZ6 603 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 TWF2Q6IBS0 349 aaKnown RBP10.52□□□□□ -0.73
CDCA3-204ENST00000535406 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 FERMT3Q86UX7 667 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 ECHDC2Q86YB7 292 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 RNF169Q8NCN4 708 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
CDCA3-204ENST00000535406 P2RX5Q93086 422 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 HLA-CQ95604 372 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 LMAN2LQ9H0V9 348 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 IFT122Q9HBG6 1241 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 TUFT1Q9NNX1 390 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 XPNPEP1Q9NQW7 623 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 SMC3Q9UQE7 1217 aa10.52□□□□□ -0.73
CDCA3-204ENST00000535406 A0A0U1RQF3 1178 aa10.51□□□□□ -0.73
CDCA3-204ENST00000535406 GRM6O15303 877 aa10.51□□□□□ -0.73
CDCA3-204ENST00000535406 ASAP2O43150 1006 aa10.51□□□□□ -0.73
CDCA3-204ENST00000535406 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms