RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SEMA4AQ9H3S1 761 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-205ENST00000535375 RAD17O75943 681 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 BPIP17213 487 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 XPAP23025 273 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-205ENST00000535375 HGFACQ04756 655 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 DBX2Q6ZNG2 339 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 HDGFL2Q7Z4V5 671 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-205ENST00000535375 RASSF3Q86WH2 238 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 SHCBP1Q8NEM2 672 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 CFHR4Q92496 578 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 NKD2Q969F2 451 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-205ENST00000535375 SLC6A15Q9H2J7 730 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 TMX1Q9H3N1 280 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 NELFAQ9H3P2 528 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 CD248Q9HCU0 757 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 PRKAB1Q9Y478 270 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 MYPNQ86TC9 1320 aa7.17□□□□□ -1.26
PRKDC-205ENST00000535375 C2orf78A6NCI8 922 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 ELL2O00472 640 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-205ENST00000535375 NEMP1O14524 444 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 KDM1AO60341 852 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 ULK1O75385 1050 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 COMTP21964 271 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 SELENOPP49908 381 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 ADCY7P51828 1080 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 BPIFB4P59827 614 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 TCIRG1Q13488 830 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 KRT40Q6A162 431 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 FUKQ8N0W3 1084 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 RABGGTAQ92696 567 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 RPL10LQ96L21 214 aaKnown RBP7.16□□□□□ -1.26
PRKDC-205ENST00000535375 C1QTNF3Q9BXJ4 246 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 ANO3Q9BYT9 981 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 USP18Q9UMW8 372 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 APOBEC2Q9Y235 224 aaKnown RBP7.16□□□□□ -1.26
PRKDC-205ENST00000535375 PCDHB6Q9Y5E3 794 aa7.16□□□□□ -1.26
PRKDC-205ENST00000535375 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 LCHNA4D1U4 455 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 PMS2P1A4D2B8 440 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 BRINP1O60477 761 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 FSBPO95073 299 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 EGFLAMQ63HQ2 1017 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 POLNQ7Z5Q5 900 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 STRA8Q7Z7C7 330 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 CXorf67Q86X51 503 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-205ENST00000535375 CDYL2Q8N8U2 506 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 PLA2G15Q8NCC3 412 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 UIMC1Q96RL1 719 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 OSBPL6Q9BZF3 934 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 HAPLN2Q9GZV7 340 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 MS4A5Q9H3V2 200 aa7.15□□□□□ -1.26
PRKDC-205ENST00000535375 PRSS38A1L453 326 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 MUSKO15146 869 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 HNRNPLP14866 589 aaKnown RBP eCLIP7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ID4P47928 161 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 SESN3P58005 492 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 NFKB2Q00653 900 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 HHEXQ03014 270 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 RIN1Q13671 783 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 GRM7Q14831 915 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ACAP1Q15027 740 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ZXDCQ2QGD7 858 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ZBTB41Q5SVQ8 909 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 CLEC14AQ86T13 490 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 PALM2Q8IXS6 379 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ANKRD53Q8N9V6 530 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 FAM89AQ96GI7 184 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 TMEM176AQ96HP8 235 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 ADOQ96SZ5 270 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 WNT8AQ9H1J5 351 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 C14orf93Q9H972 538 aaKnown RBP7.14□□□□□ -1.27
PRKDC-205ENST00000535375 PLA2G3Q9NZ20 509 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 SLC30A1Q9Y6M5 507 aa7.14□□□□□ -1.27
PRKDC-205ENST00000535375 NRP2O60462 931 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 INSRRP14616 1297 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 MSX2P35548 267 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-205ENST00000535375 KRT26Q7Z3Y9 468 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 GPR135Q8IZ08 494 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 GAB3Q8WWW8 586 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 WWC2-AS2Q96NR7 200 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 TSC22D4Q9Y3Q8 395 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 NUMBLQ9Y6R0 609 aa7.13□□□□□ -1.27
PRKDC-205ENST00000535375 TOX4O94842 621 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 JUNP05412 331 aaKnown RBP7.12□□□□□ -1.27
PRKDC-205ENST00000535375 PFKMP08237 780 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 CLEC2LP0C7M8 214 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 VSIG10L2P0DP72 767 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 GPR15P49685 360 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 NRG3P56975 720 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 PPARAQ07869 468 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-205ENST00000535375 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 IQSEC1Q6DN90 963 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 CCDC62Q6P9F0 684 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 RSAD2Q8WXG1 361 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 NCDNQ9UBB6 729 aa7.12□□□□□ -1.27
PRKDC-205ENST00000535375 MYRFQ9Y2G1 1151 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms