RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SPATA33Q96N06 139 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 MFAP3LO75121 409 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 P4HBP07237 508 aaKnown RBP19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 RMDN2Q96LZ7 410 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 CYP26B1Q9NR63 512 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 ACCSLQ4AC99 568 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 NEDD4P46934 1319 aa19.39■□□□□ 0.69
SFSWAP-203ENST00000535236 KPNA7A9QM74 516 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 NR1D1P20393 614 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 ASIC4Q96FT7 647 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 CALR3Q96L12 384 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 FGFR1OP2Q9NVK5 253 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 NECTIN1Q15223 517 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 WDR75Q8IWA0 830 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 C11orf70Q9BRQ4 267 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 POLR3FQ9H1D9 316 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 KDM5CP41229 1560 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 MAPK13O15264 365 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 CAPRIN1Q14444 709 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 MRPL4Q9BYD3 311 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 SP110Q9HB58 689 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 COL15A1P39059 1388 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 E5RI56 91 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 H3BRJ5 948 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 SARS2Q9NP81 518 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 GTSE1Q9NYZ3 720 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 TEKT2Q9UIF3 430 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 MROH7-TTC4A0A0A0MT08 1334 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 PALMO75781 387 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 TTC8Q8TAM2 541 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 LZICQ8WZA0 190 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 NRBF2Q96F24 287 aa19.38■□□□□ 0.69
SFSWAP-203ENST00000535236 TBC1D10CQ8IV04 446 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 RNF168Q8IYW5 571 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 PIP4K2CQ8TBX8 421 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 GCC2Q8IWJ2 1684 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 COASYQ13057 564 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 CEP95Q96GE4 821 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 POLR3CQ9BUI4 534 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 NFU1Q9UMS0 254 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 L3MBTL1Q9Y468 752 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 CPB1P15086 417 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 ADRA2BP18089 450 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 TTC39CQ8N584 583 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 CEP19Q96LK0 163 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 PARD6BQ9BYG5 372 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 ADORA2BP29275 332 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 COPB2P35606 906 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 DCAF4L1Q3SXM0 396 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 VPS11Q9H270 941 aa19.37■□□□□ 0.69
SFSWAP-203ENST00000535236 VAMP7P51809 220 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 EFHC2Q5JST6 749 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 INTUQ9ULD6 942 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SKIV2LQ15477 1246 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 ACAD11Q709F0 780 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 STK36Q9NRP7 1315 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 MOCS2O96007 188 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 PYGBP11216 843 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SMARCA1P28370 1054 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 COPS2P61201 443 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 PSMC1P62191 440 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 PSMC5P62195 406 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 NAALADL2Q58DX5 795 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 TRIM45Q9H8W5 580 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 PLEKHG2Q9H7P9 1386 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 RPSAP08865 295 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SYT2Q8N9I0 419 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SCHIP1Q9P0W5 487 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SUFUQ9UMX1 484 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 SNX24Q9Y343 169 aa19.36■□□□□ 0.69
SFSWAP-203ENST00000535236 POTEB3A0JP26 581 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 POTECB2RU33 542 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 RAD51Q06609 339 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 LBRQ14739 615 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 VEPH1Q14D04 833 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 POTEBQ6S5H4 581 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 SH3KBP1Q96B97 665 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 EIF2AQ9BY44 585 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 TRIM55Q9BYV6 548 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 TMEM260Q9NX78 707 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 PVALEFA0A1B0GWK0 134 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 CCDC151A5D8V7 595 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 GNA15P30679 374 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 NME3Q13232 169 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 GRM4Q14833 912 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 FSCBQ5H9T9 825 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 NUGGCQ68CJ6 796 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 PCSK1NQ9UHG2 260 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 AFF2P51816 1311 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 HEATR6Q6AI08 1181 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 ZNF668Q96K58 619 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms