RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 AKTIPQ9H8T0 292 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ANO10Q9NW15 660 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 PIH1D1Q9NWS0 290 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 VPS18Q9P253 973 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ZC3H7BQ9UGR2 993 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 EVLQ9UI08 416 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 TRIM17Q9Y577 477 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ATP6V1DQ9Y5K8 247 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 RAB3GAP2Q9H2M9 1393 aa5.65□□□□□ -1.51
SNHG1-201ENST00000535076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.65□□□□□ -1.517e-33■□□□□ 8.4
SNHG1-201ENST00000535076 ATP10AO60312 1499 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 RB1CC1Q8TDY2 1594 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 H3BQF6 201 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 H3BRB1 525 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PLSCR1O15162 318 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 POLR3DP05423 398 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 RHOXF2BP0C7M4 288 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TOP1P11387 765 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 RAC2P15153 192 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PRLRP16471 622 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 IL10P22301 178 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 IL32P24001 234 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 STAT3P40763 770 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CETN2P41208 172 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 BPIFB4P59827 614 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 KRT83P78385 493 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PLOD1Q02809 727 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 BNIP1Q12981 228 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 XRCC4Q13426 336 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 E2F2Q14209 437 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CAVIN4Q5BKX8 364 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 WDR45BQ5MNZ6 344 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 ZBTB41Q5SVQ8 909 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 GRAMD4Q6IC98 578 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 KLC3Q6P597 504 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CYB5D1Q6P9G0 228 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CATSPER4Q7RTX7 472 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 DZIP1LQ8IYY4 767 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 FUKQ8N0W3 1084 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CCAR2Q8N163 923 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 NLGN1Q8N2Q7 840 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TMCO5AQ8N6Q1 288 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 AFAP1L1Q8TED9 768 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 SH3KBP1Q96B97 665 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 EFHD2Q96C19 240 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CEP19Q96LK0 163 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TBATAQ96M53 351 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CATSPER2Q96P56 530 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 SETDB2Q96T68 719 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 MPHOSPH9Q99550 1183 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 BPIFA3Q9BQP9 254 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 RHOXF2Q9BQY4 288 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TTPALQ9BTX7 342 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 FAM129AQ9BZQ8 928 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TRPV6Q9H1D0 765 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 BICC1Q9H694 974 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PCDH12Q9NPG4 1184 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 FANCFQ9NPI8 374 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 RMND1Q9NWS8 449 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 DDX56Q9NY93 547 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 MTRF1LQ9UGC7 380 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 FBXL5Q9UKA1 691 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 KIAA1257Q9ULG3 409 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PPP1R9AQ9ULJ8 1098 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 GRID1Q9ULK0 1009 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 SOX13Q9UN79 622 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 PA2G4Q9UQ80 394 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 CFL2Q9Y281 166 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 FAM32AQ9Y421 112 aaKnown RBP5.64□□□□□ -1.51
SNHG1-201ENST00000535076 SNX9Q9Y5X1 595 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 UBN2Q6ZU65 1347 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 ABCC9O60706 1549 aa5.64□□□□□ -1.51
SNHG1-201ENST00000535076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 LOC105371267A0A1B0GV96 52 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TRIM64A6NGJ6 449 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TRIM64BA6NI03 449 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 METTL12A8MUP2 240 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 AKR1B15C9JRZ8 316 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 E7ENQ6 273 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PDE2AO00408 941 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PSMD14O00487 310 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 FSCN2O14926 492 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TLR3O15455 904 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 FIBPO43427 364 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PHACTR2O75167 634 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 BAG3O95817 575 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 KRT14P02533 472 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 APOEP02649 317 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 RPLP1P05386 114 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ITGB1P05556 798 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CYP2C9P11712 490 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 NCAM1P13591 858 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 KRT13P13646 458 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CTRB1P17538 263 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PTPRAP18433 802 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms