RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 CDYL2Q8N8U2 506 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 FEZF2Q8TBJ5 459 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 GAB3Q8WWW8 586 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 HIST1H2AHQ96KK5 128 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 KCNC2Q96PR1 638 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 HIST1H2AJQ99878 128 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 SOX7Q9BT81 388 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 KIAA1683Q9H0B3 1180 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 QRSL1Q9H0R6 528 aaKnown RBP8.67□□□□□ -1.02
CASP4-213ENST00000534356 CCM2LQ9NUG4 571 aaPredicted RBP8.67□□□□□ -1.02
CASP4-213ENST00000534356 POLR3BQ9NW08 1133 aaPredicted RBP8.67□□□□□ -1.02
CASP4-213ENST00000534356 DNAI1Q9UI46 699 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 TNKSO95271 1327 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 MYBL2P10244 700 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 JAG1P78504 1218 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 PPARAQ07869 468 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 TOR2AQ5JU69 321 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 FAM124AQ86V42 546 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 KBTBD2Q8IY47 623 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 RTKN2Q8IZC4 609 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 NKD2Q969F2 451 aaPredicted RBP8.66□□□□□ -1.02
CASP4-213ENST00000534356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.66□□□□□ -1.02
CASP4-213ENST00000534356 SYNPO2Q9UMS6 1093 aa8.66□□□□□ -1.02
CASP4-213ENST00000534356 B4GALT3O60512 393 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 MRE11P49959 708 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 MEOX1P50221 254 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.02
CASP4-213ENST00000534356 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 PGM2L1Q6PCE3 622 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 GAREM2Q75VX8 874 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 KCNK18Q7Z418 384 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 RALYLQ86SE5 291 aaKnown RBP8.65□□□□□ -1.02
CASP4-213ENST00000534356 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
CASP4-213ENST00000534356 OR14C36Q8NHC7 312 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 RAX2Q96IS3 184 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
CASP4-213ENST00000534356 USP40Q9NVE5 1235 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 DNAJC28Q9NX36 388 aa8.65□□□□□ -1.02
CASP4-213ENST00000534356 SASH1O94885 1247 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 GPR15P49685 360 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 ADAM15Q13444 863 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 KRTAP19-4Q3LI73 84 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 RSAD2Q8WXG1 361 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 FUBP3Q96I24 572 aaKnown RBP eCLIP8.64□□□□□ -1.03
CASP4-213ENST00000534356 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 WDR92Q96MX6 357 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
CASP4-213ENST00000534356 DPP7Q9UHL4 492 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 EVLQ9UI08 416 aaPredicted RBP8.64□□□□□ -1.03
CASP4-213ENST00000534356 VWA7Q9Y334 891 aa8.64□□□□□ -1.03
CASP4-213ENST00000534356 TRIM75PA6NK02 468 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 FZD9O00144 591 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 B4GALT4O60513 344 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 HNRNPLP14866 589 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASP4-213ENST00000534356 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
CASP4-213ENST00000534356 PCBP2Q15366 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASP4-213ENST00000534356 TBR1Q16650 682 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 KLHDC10Q6PID8 442 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 ZDHHC14Q8IZN3 488 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 PPP1R14CQ8TAE6 165 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 FAM184BQ9ULE4 1060 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 CDY2AQ9Y6F7 541 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 DUSP10Q9Y6W6 482 aa8.63□□□□□ -1.03
CASP4-213ENST00000534356 SHTN1A0MZ66 631 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 OTOL1A6NHN0 477 aaPredicted RBP8.62□□□□□ -1.03
CASP4-213ENST00000534356 SEC24DO94855 1032 aaPredicted RBP8.62□□□□□ -1.03
CASP4-213ENST00000534356 RBP3P10745 1247 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 CDK17Q00537 523 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 SPIDRQ14159 915 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 PTPN21Q16825 1174 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 PLEKHG6Q3KR16 790 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 AGBL4Q5VU57 503 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 BORAQ6PGQ7 559 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 AMOTL1Q8IY63 956 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 TSPEARQ8WU66 669 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 AUTS2Q8WXX7 1259 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 ZCCHC4Q9H5U6 513 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 MKS1Q9NXB0 559 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 INVSQ9Y283 1065 aa8.62□□□□□ -1.03
CASP4-213ENST00000534356 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA12O60330 932 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 CFBP00751 764 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 OSMP13725 252 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 XPAP23025 273 aaPredicted RBP8.61□□□□□ -1.03
CASP4-213ENST00000534356 MTNR1BP49286 362 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 CD69Q07108 199 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 CLUL1Q15846 466 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 MUM1Q2TAK8 710 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 CCDC178Q5BJE1 867 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 ZMAT1Q5H9K5 638 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 LGI4Q8N135 537 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 GFM2Q969S9 779 aaKnown RBP8.61□□□□□ -1.03
CASP4-213ENST00000534356 OSBPL6Q9BZF3 934 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 OR10A2Q9H208 303 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA9Q9Y5G4 932 aaKnown RBP8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms