RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MYO1BO43795 1136 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 AOC2O75106 756 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 ACRP10323 421 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 CALML3P27482 149 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 DEKP35659 375 aaKnown RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 KRT2P35908 639 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 GMPSP49915 693 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 ICA1Q05084 483 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 ZNF543Q08ER8 600 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 TNFAIP1Q13829 316 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 DOC2BQ14184 412 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 PTPAQ15257 358 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 ABCB5Q2M3G0 1257 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 SHROOM1Q2M3G4 852 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 CERKLQ49MI3 558 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 OVOS1Q6IE37 1185 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 C6orf15Q6UXA7 325 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 ILDR2Q71H61 639 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 CYFIP1Q7L576 1253 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 HDXQ7Z353 690 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 ZNF713Q8N859 430 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 RBBP8NLQ8NC74 664 aaPredicted RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 DAGLBQ8NCG7 672 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 GMCL1P1Q8NEA9 526 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 WNT8BQ93098 351 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 ATG4CQ96DT6 458 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 RIOX1Q9H6W3 641 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 PRDM10Q9NQV6 1147 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 PRDM6Q9NQX0 595 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 DDX19AQ9NUU7 478 aaKnown RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 HIF3AQ9Y2N7 669 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 MSRB2Q9Y3D2 182 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 CLIC4Q9Y696 253 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 OTOFQ9HC10 1997 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 RBBP6Q7Z6E9 1792 aaKnown RBP6.49□□□□□ -1.37
CHKA-208ENST00000533910 FAM237AA0A1B0GTK4 181 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 hCG_1642624A0A1W2PR95 340 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 ESYT2A0FGR8 921 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 STXBP3O00186 592 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 MPHOSPH10O00566 681 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 SPTLC2O15270 562 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 PPP6R2O75170 966 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 GOLGA8HP0CJ92 632 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 EEF2P13639 858 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 POLR2BP30876 1174 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 TRAPPC10P48553 1259 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 TOB1P50616 345 aaPredicted RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 JAG1P78504 1218 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 RRP1BQ14684 758 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 SEPT2Q15019 361 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 SLC39A14Q15043 492 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 STK38Q15208 465 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 KIF4BQ2VIQ3 1234 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 ARSHQ5FYA8 562 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 AXDND1Q5T1B0 1012 aaPredicted RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 GPATCH4Q5T3I0 446 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 WWC2Q6AWC2 1192 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 SCARA3Q6AZY7 606 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 ADALQ6DHV7 355 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 MRM1Q6IN84 353 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 LRSAM1Q6UWE0 723 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 RBM43Q6ZSC3 357 aaKnown RBP6.48□□□□□ -1.37
CHKA-208ENST00000533910 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 GAS2L3Q86XJ1 694 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 SIAH1Q8IUQ4 282 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 Q8N3U1 123 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 KLHL23Q8NBE8 558 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 CCDC148Q8NFR7 591 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 MORC4Q8TE76 937 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 DCAF4Q8WV16 495 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 TMEM40Q8WWA1 233 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 MTMR8Q96EF0 704 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 TEPSINQ96N21 525 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 TMEM39BQ9GZU3 492 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 SEMA6BQ9H3T3 888 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 VEZTQ9HBM0 779 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 BARHL2Q9NY43 387 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 CLIP2Q9UDT6 1046 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 PFDN2Q9UHV9 154 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 PCDHA7Q9UN72 937 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
CHKA-208ENST00000533910 WDR90Q96KV7 1748 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 SYCE3A1L190 88 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 GOLGA6L4A6NEF3 574 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 GOLGA6L3A6NEY3 463 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 PDPK1O15530 556 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 LETM1O95202 739 aaPredicted RBP6.47□□□□□ -1.37
CHKA-208ENST00000533910 BMP15O95972 392 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 GH2P01242 217 aa6.47□□□□□ -1.37
CHKA-208ENST00000533910 PGRP06401 933 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms