RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 KRT2P35908 639 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 QARSP47897 775 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 DNM2P50570 870 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 SPIRE1Q08AE8 756 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 NR5A1Q13285 461 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 PLA2G4FQ68DD2 849 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 GCOM2Q9BZD3 368 aaPredicted RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 IGFLR1Q9H665 355 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 CYP26B1Q9NR63 512 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 FAM50BQ9Y247 325 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 A0A087WZ62 844 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 DCXO43602 365 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCF1-202ENST00000533438 GLP2RO95838 553 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 LAG3P18627 525 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 ZP2Q05996 745 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 EPHA7Q15375 998 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 CLLU1OSQ5K130 101 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
CLCF1-202ENST00000533438 MSLNLQ96KJ4 702 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 FDXACB1Q9BRP7 624 aaPredicted RBP12.67□□□□□ -0.38
CLCF1-202ENST00000533438 TRAIPQ9BWF2 469 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 DHX33Q9H6R0 707 aaKnown RBP12.67□□□□□ -0.38
CLCF1-202ENST00000533438 TLR9Q9NR96 1032 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 CHST12Q9NRB3 414 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 SUCLA2Q9P2R7 463 aaPredicted RBP12.67□□□□□ -0.38
CLCF1-202ENST00000533438 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
CLCF1-202ENST00000533438 FSCN2O14926 492 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 EYA4O95677 639 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 EOMESO95936 686 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 SFPQP23246 707 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLCF1-202ENST00000533438 NRIP1P48552 1158 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 NEK4P51957 841 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 NPEPPSP55786 919 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 ERVFC1P60507 584 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 PLCB3Q01970 1234 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 NHLH1Q02575 133 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 SMAD4Q13485 552 aaKnown RBP12.66□□□□□ -0.38
CLCF1-202ENST00000533438 CLUL1Q15846 466 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 RHPN2Q8IUC4 686 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 ADHFE1Q8IWW8 467 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 LRRC43Q8N309 656 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 JPH2Q9BR39 696 aaPredicted RBP12.66□□□□□ -0.38
CLCF1-202ENST00000533438 LXNQ9BS40 222 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 INO80BQ9C086 356 aaPredicted RBP12.66□□□□□ -0.38
CLCF1-202ENST00000533438 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 BRMS1Q9HCU9 246 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 CLEC1BQ9P126 229 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
CLCF1-202ENST00000533438 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 JAK2O60674 1132 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
CLCF1-202ENST00000533438 PHKA2P46019 1235 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 NDUFV1P49821 464 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 MRE11P49959 708 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 COASYQ13057 564 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 HERC4Q5GLZ8 1057 aaPredicted RBP12.65□□□□□ -0.38
CLCF1-202ENST00000533438 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
CLCF1-202ENST00000533438 KCNT2Q6UVM3 1135 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 BMP8AQ7Z5Y6 402 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
CLCF1-202ENST00000533438 EXOC8Q8IYI6 725 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 ABI1Q8IZP0 508 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 SMRP1Q8NCR6 262 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 HELQQ8TDG4 1101 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
CLCF1-202ENST00000533438 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 CEP170P1Q96L14 293 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 FBXL18Q96ME1 805 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 COL4A3BPQ9Y5P4 624 aa12.65□□□□□ -0.38
CLCF1-202ENST00000533438 WNT7AO00755 349 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 ST18O60284 1047 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 BAG4O95429 457 aaKnown RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 YWHABP31946 246 aaKnown RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 PPM1AP35813 382 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 PBX3P40426 434 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 RFC5P40937 340 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 POLGP54098 1239 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms