RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 MYH7P12883 1935 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 CHUKO15111 745 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 ATP9BO43861 1147 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 LZTS3O60299 673 aaPredicted RBP5.89□□□□□ -1.47
CKAP5-212ENST00000533413 KLHL41O60662 606 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 GALNSP34059 522 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 SLC8A3P57103 927 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 GTF2IP78347 998 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 MRPS35P82673 323 aaKnown RBP5.89□□□□□ -1.47
CKAP5-212ENST00000533413 CKAP4Q07065 602 aaKnown RBP5.89□□□□□ -1.47
CKAP5-212ENST00000533413 NR5A1Q13285 461 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 SKIDA1Q1XH10 827 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 MUM1Q2TAK8 710 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 C1orf228Q6PIY5 440 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 MTHFD1LQ6UB35 978 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 GBP6Q6ZN66 633 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 MIGA1Q8NAN2 632 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 ARMC2Q8NEN0 867 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 PAGE5Q96GU1 130 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 VPS16Q9H269 839 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 FAM217BQ9NTX9 383 aaPredicted RBP5.89□□□□□ -1.47
CKAP5-212ENST00000533413 ZSWIM5Q9P217 1185 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 TSR3Q9UJK0 312 aaKnown RBP5.89□□□□□ -1.47
CKAP5-212ENST00000533413 CTNND2Q9UQB3 1225 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 ITIH6Q6UXX5 1313 aa5.89□□□□□ -1.47
CKAP5-212ENST00000533413 A0A0U1RQJ8 604 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ICMTO60725 284 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RNF40O75150 1001 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SNUPNO95149 360 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MBD4O95243 580 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PARP1P09874 1014 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 IMPDH2P12268 514 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PDE6AP16499 860 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KLRK1P26718 216 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GUCY1A2P33402 732 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MCAMP43121 646 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MAPK9P45984 424 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GYG1P46976 350 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 FXR1P51114 621 aaKnown RBP eCLIP5.88□□□□□ -1.472e-6■■■□□ 19.1
CKAP5-212ENST00000533413 CTDSPL2Q05D32 466 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MAP3K12Q12852 859 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 STIM1Q13586 685 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ATP13A4Q4VNC1 1196 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RCSD1Q6JBY9 416 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 WDR93Q6P2C0 686 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 USP49Q70CQ1 688 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KIAA1328Q86T90 577 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 TXNRD3Q86VQ6 643 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ZSCAN29Q8IWY8 852 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 FERMT2Q96AC1 680 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CDK5RAP3Q96JB5 506 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 UBAC1Q9BSL1 405 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MKNK1Q9BUB5 465 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 VIPAS39Q9H9C1 493 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ABHD10Q9NUJ1 306 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 AATFQ9NY61 560 aaKnown RBP eCLIP5.88□□□□□ -1.471e-12■■□□□ 14.3
CKAP5-212ENST00000533413 GIMAP2Q9UG22 337 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 AFG3L2Q9Y4W6 797 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 EPN1Q9Y6I3 576 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PASKQ96RG2 1323 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MYH2Q9UKX2 1941 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 F8VZ95 297 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GYPCP04921 128 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GZMAP12544 262 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PECAM1P16284 738 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 HSPA6P17066 643 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PBX1P40424 430 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 EPS15P42566 896 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 AARSP49588 968 aaKnown RBP eCLIP5.88□□□□□ -1.473e-6■□□□□ 10.9
CKAP5-212ENST00000533413 GABREP78334 506 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 GSTO1P78417 241 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 UBXN1Q04323 297 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ALX1Q15699 326 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 NCAPH2Q6IBW4 605 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SHQ1Q6PI26 577 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 OTOP3Q7RTS5 596 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 NCAPG2Q86XI2 1143 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SMYD4Q8IYR2 804 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 CRACR2BQ8N4Y2 399 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 NOA1Q8NC60 698 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SLAIN1Q8ND83 568 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 EHBP1Q8NDI1 1231 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 FBXO22Q8NEZ5 403 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 SPATA20Q8TB22 786 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 DCPSQ96C86 337 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ZBED3Q96IU2 234 aaPredicted RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 EPSTI1Q96J88 318 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 RPGRIP1Q96KN7 1286 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 MED15Q96RN5 788 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 STRBPQ96SI9 672 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PYM1Q9BRP8 204 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ZKSCAN3Q9BRR0 538 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 KATNAL1Q9BW62 490 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 PIH1D3Q9NQM4 214 aaKnown RBP5.88□□□□□ -1.47
CKAP5-212ENST00000533413 VPS45Q9NRW7 570 aa5.88□□□□□ -1.47
CKAP5-212ENST00000533413 ZNHIT6Q9NWK9 470 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms