RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 FGFR4P22455 802 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 TXLNAP40222 546 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 KCNJ6P48051 423 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 DEFB103AP81534 67 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 NFX1Q12986 1120 aaKnown RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 ODR4Q5SWX8 454 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 RNF149Q8NC42 400 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 RAD54LQ92698 747 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 SLC9A7Q96T83 725 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 POLD4Q9HCU8 107 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 ENPP3O14638 875 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 SSBP05455 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 PTENP60484 403 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 POU5F1BQ06416 359 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 MAPK7Q13164 816 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 TFDP1Q14186 410 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 MCM6Q14566 821 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 DSC3Q14574 896 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 FAM43BQ6ZT52 329 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 SRGAP1Q7Z6B7 1085 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 DAW1Q8N136 415 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 PHOSPHO2Q8TCD6 241 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 KIFAP3Q92845 792 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 FTHL17Q9BXU8 183 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-214ENST00000533209 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
SSBP3-214ENST00000533209 HIP1RO75146 1068 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 AMHP03971 560 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSBP3-214ENST00000533209 PHKA2P46019 1235 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSBP3-214ENST00000533209 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
SSBP3-214ENST00000533209 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 GPBP1Q86WP2 473 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 HERC6Q8IVU3 1022 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
SSBP3-214ENST00000533209 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 ADAM2Q99965 735 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 NFKBIZQ9BYH8 718 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 SCAND2PQ9GZW5 306 aaPredicted RBP13.28□□□□□ -0.28
SSBP3-214ENST00000533209 KCND2Q9NZV8 630 aa13.28□□□□□ -0.28
SSBP3-214ENST00000533209 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 LRRIQ4A6NIV6 560 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 PBX2P40425 430 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 RABGGTBP53611 331 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 CDCA2Q69YH5 1023 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-214ENST00000533209 CCDC73Q6ZRK6 1079 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 PDILTQ8N807 584 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 PBX4Q9BYU1 374 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 RGS18Q9NS28 235 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.29
SSBP3-214ENST00000533209 DENND3A2RUS2 1198 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 C9IYK1 514 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 GJB5O95377 273 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 STAT6P42226 847 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 NAMPTP43490 491 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 E2F4Q16254 413 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 AMHR2Q16671 573 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 ADALQ6DHV7 355 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 ADGRA3Q8IWK6 1321 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 CRIPAKQ8N1N5 446 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 IFT74Q96LB3 600 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 REEP2Q9BRK0 252 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 YBX2Q9Y2T7 364 aaKnown RBP13.26□□□□□ -0.29
SSBP3-214ENST00000533209 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
SSBP3-214ENST00000533209 MICAL3Q7RTP6 2002 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 LOXHD1Q8IVV2 1947 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 INO80B-WBP1J3KQ70 363 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 UPP2O95045 317 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 MYOGP15173 224 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 ZSCAN20P17040 1043 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms