RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FGFR1P11362 822 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 GJB2P29033 226 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 TFF2Q03403 129 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 NBR1Q14596 966 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 TIGD5Q53EQ6 642 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 ECHDC2Q86YB7 292 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 P2RX5Q93086 422 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 HLA-CQ95604 372 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 LMAN2LQ9H0V9 348 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 TUFT1Q9NNX1 390 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 DACT1Q9NYF0 836 aa33.78■■■■□ 3
SSSCA1-207ENST00000533115 KIAA1671Q9BY89 1806 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 GRM6O15303 877 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 ASAP2O43150 1006 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 SRGAP2CP0DJJ0 459 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 TOB1P50616 345 aaPredicted RBP33.77■■■■□ 3
SSSCA1-207ENST00000533115 LAMTOR4Q0VGL1 99 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 NAALADL2Q58DX5 795 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 C4orf32Q8N8J7 132 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 PIGOQ8TEQ8 1089 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 CCDC43Q96MW1 224 aaKnown RBP33.77■■■■□ 3
SSSCA1-207ENST00000533115 XPNPEP1Q9NQW7 623 aa33.77■■■■□ 3
SSSCA1-207ENST00000533115 A0A0U1RQF3 1178 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 HOXA2O43364 376 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 DGAT1O75907 488 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 XRCC6P12956 609 aaKnown RBP eCLIP33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 RARRES1P49788 294 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 AAK1Q2M2I8 961 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 CATSPER4Q7RTX7 472 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 FERMT3Q86UX7 667 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 CATSPER3Q86XQ3 398 aa33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 POLR3CQ9BUI4 534 aaPredicted RBP33.76■■■□□ 2.99
SSSCA1-207ENST00000533115 MED24O75448 989 aa33.75■■■□□ 2.99
SSSCA1-207ENST00000533115 ERMNQ8TAM6 284 aa33.75■■■□□ 2.99
SSSCA1-207ENST00000533115 BACH2Q9BYV9 841 aa33.75■■■□□ 2.99
SSSCA1-207ENST00000533115 TMEM117Q9H0C3 514 aa33.75■■■□□ 2.99
SSSCA1-207ENST00000533115 PLAGL2Q9UPG8 496 aa33.75■■■□□ 2.99
SSSCA1-207ENST00000533115 A0A087WWV3 80 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 SPOUT1Q5T280 376 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 MCTP1Q6DN14 999 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 SRGAP1Q7Z6B7 1085 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 RNF169Q8NCN4 708 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 ALG13Q9NP73 1137 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 RNF19AQ9NV58 838 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 TYW1Q9NV66 732 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 SMC3Q9UQE7 1217 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 PIN4Q9Y237 131 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 PCDHB6Q9Y5E3 794 aa33.74■■■□□ 2.99
SSSCA1-207ENST00000533115 EOMESO95936 686 aa33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 MXD4Q14582 209 aaPredicted RBP33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 ZNF598Q86UK7 904 aaKnown RBP33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 KLHL23Q8NBE8 558 aa33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 CASD1Q96PB1 797 aa33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 TRAIPQ9BWF2 469 aa33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 NSUN3Q9H649 340 aaKnown RBP33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 AAASQ9NRG9 546 aa33.73■■■□□ 2.99
SSSCA1-207ENST00000533115 ITGB1P05556 798 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 RPA1P27694 616 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 FXR2P51116 673 aaKnown RBP eCLIP33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 TWF2Q6IBS0 349 aaKnown RBP33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 RNF149Q8NC42 400 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 NACC1Q96RE7 527 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 MINDY3Q9H8M7 445 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 PCDHB12Q9Y5F1 795 aa33.72■■■□□ 2.99
SSSCA1-207ENST00000533115 H3BQV1 296 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 PHKA2P46019 1235 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 PTGDRQ13258 359 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 TCEAL5Q5H9L2 206 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 ABI1Q8IZP0 508 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 CWH43Q9H720 699 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 HCSTQ9UBK5 93 aa33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 DBR1Q9UK59 544 aaKnown RBP33.71■■■□□ 2.99
SSSCA1-207ENST00000533115 ATF7P17544 494 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-207ENST00000533115 SPPL3Q8TCT6 385 aa33.7■■■□□ 2.99
SSSCA1-207ENST00000533115 AGPAT5Q9NUQ2 364 aa33.7■■■□□ 2.99
SSSCA1-207ENST00000533115 BRWD1Q9NSI6 2320 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 TTC28Q96AY4 2481 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 SKIP12755 728 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 ARL2P36404 184 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 KCNQ1P51787 676 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 CLLU1OSQ5K130 101 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 HAUS3Q68CZ6 603 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 POTEGQ6S5H5 508 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 UBE2ZQ9H832 354 aaPredicted RBP33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 LRWD1Q9UFC0 647 aa33.69■■■□□ 2.98
SSSCA1-207ENST00000533115 MYO7AQ13402 2215 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 LAD1O00515 517 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 USO1O60763 962 aaKnown RBP33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 BMP1P13497 986 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 MUTP22033 750 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 DNAJB1P25685 340 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 CAMK1Q14012 370 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 TFDP1Q14186 410 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 PDIA5Q14554 519 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 RILPL1Q5EBL4 403 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 LRRC55Q6ZSA7 311 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 LRRC43Q8N309 656 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 COLGALT1Q8NBJ5 622 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms