RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 NFX1Q12986 1120 aaKnown RBP13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MAPK7Q13164 816 aa13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 CAPSQ13938 189 aa13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 DYMQ7RTS9 669 aa13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MYMKA6NI61 221 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ASAP2O43150 1006 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 EIF4BP23588 611 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SYKP43405 635 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CDC42EP1Q00587 391 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 LONRF3Q496Y0 759 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TMEM240Q5SV17 173 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 KIFAP3Q92845 792 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 REEP2Q9BRK0 252 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 IFIH1Q9BYX4 1025 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PADI3Q9ULW8 664 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 LRRIQ4A6NIV6 560 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PRPF40AO75400 957 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 FGBP02675 491 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PEX3P56589 373 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GIT2Q14161 759 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SHHQ15465 462 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 FAM228AQ86W67 206 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 DDX12PQ92771 950 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 KCND2Q9NZV8 630 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
TRAF3IP2-212ENST00000532708 MYH11P35749 1972 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CASP1P29466 404 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 AFMP43652 599 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PAK2Q13177 524 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TFDP1Q14186 410 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 DRC1Q96MC2 740 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PFKMP08237 780 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PTENP60484 403 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GSE1Q14687 1217 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CNKSR3Q6P9H4 555 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CLEC17AQ6ZS10 378 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SEPT8Q92599 483 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TIPINQ9BVW5 301 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 GPR182O15218 404 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ZNF202O95125 648 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SLFN14P0C7P3 912 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 BMP8BP34820 402 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 NAMPTP43490 491 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PHKA2P46019 1235 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 NPTX2P47972 431 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 TMX1Q9H3N1 280 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
TRAF3IP2-212ENST00000532708 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 FAM13AO94988 1023 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PLS3P13797 630 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 IDEP14735 1019 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 LIG1P18858 919 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 IKBKEQ14164 716 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-212ENST00000532708 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms