RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MGRN1O60291 552 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PCYT1AP49585 367 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 AMPD3Q01432 767 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 KPNB1Q14974 876 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 GRAMD1CQ8IYS0 662 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 CAVIN3Q969G5 261 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 NR1H4Q96RI1 486 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 CHP1Q99653 195 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM192AQ9GZU8 254 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 Q9H521 79 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM207AQ9NSI2 230 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PCDHGC5Q9Y5F6 944 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PCDHA1Q9Y5I3 950 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 MARF1Q9Y4F3 1742 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 TCHHQ07283 1943 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L10C9JJH3 530 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 DKC1O60832 514 aaKnown RBP eCLIP7.3□□□□□ -1.246e-7■■■■■ 75.9
TGFBR3-209ENST00000532540 RTN2O75298 545 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 GSTT1P30711 240 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 VHLP40337 213 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 CACNA2D1P54289 1103 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PAPD7Q5XG87 772 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 IRGCQ6NXR0 463 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 KLC3Q6P597 504 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PEX26Q7Z412 305 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 WDR60Q8WVS4 1066 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 TMEM87BQ96K49 555 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 FMO2Q99518 471 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PARP2Q9UGN5 583 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 CCPG1Q9ULG6 757 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 C4BP0C0L5 1744 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 DPPA5A6NC42 116 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SPDYE3A6NKU9 549 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PDE5AO76074 875 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 BMP3P12645 472 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RASA1P20936 1047 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ALDH5A1P51649 535 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 HIRAP54198 1017 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RHBDL3P58872 404 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RNASELQ05823 741 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 UBE2SQ16763 222 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PLEKHG4BQ96PX9 1271 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RPS6KC1Q96S38 1066 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 GBA2Q9HCG7 927 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 FBXL5Q9UKA1 691 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SATB2Q9UPW6 733 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 TCRBV5S4A2TA0A5A2 114 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 MAFGO15525 162 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 TRAPPC3O43617 180 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 UBOX5O94941 541 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 KRT18P05783 430 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 MYL1P05976 194 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CHN1P15882 459 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PAX3P23760 479 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CDC25AP30304 524 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PRELPP51888 382 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 IL9RQ01113 521 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 BYSLQ13895 437 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RAPGEF1Q13905 1077 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CDC37Q16543 378 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RESP18Q5W5W9 173 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RINLQ6ZS11 566 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ERICH1Q86X53 443 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 OR2W6PQ8NHA6 318 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CDCA5Q96FF9 252 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.241e-6■□□□□ 8.7
TGFBR3-209ENST00000532540 PHACTR1Q9C0D0 580 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SH2D4AQ9H788 454 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SCN11AQ9UI33 1791 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ZNF148Q9UQR1 794 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PCDHA13Q9Y5I0 950 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CEP290O15078 2479 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 NWD2Q9ULI1 1742 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SALL3Q9BXA9 1300 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ARHGAP10A1A4S6 786 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RASGRF2O14827 1237 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 COBLO75128 1261 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 DCTN3O75935 186 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 UBTFL6P0CB48 400 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 VCAM1P19320 739 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RPS12P25398 132 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SLCO1A2P46721 670 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ASIC1P78348 528 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PPP1R15BQ5SWA1 713 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ARHGEF18Q6ZSZ5 1173 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ZFAND2BQ8WV99 257 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 CASP10Q92851 521 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 MAML3Q96JK9 1138 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 RUNDC3BQ96NL0 473 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 BLZF1Q9H2G9 400 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 TMBIM4Q9HC24 238 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 PANK4Q9NVE7 773 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 ADD3Q9UEY8 706 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 SCINQ9Y6U3 715 aa7.29□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms